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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS15240 and ABIE40_RS15245 are separated by 186 nucleotides
ABIE40_RS15245 and ABIE40_RS15250 are separated by 44 nucleotides
ABIE40_RS15250 and ABIE40_RS15255 are separated by 57 nucleotides
ABIE40_RS15255 and ABIE40_RS15260 are separated by 312 nucleotides
ABIE40_RS15240: ABIE40_RS15240 - hypothetical protein, at 3,004,944 to 3,005,207
_RS15240
ABIE40_RS15245: ABIE40_RS15245 - PAS domain-containing protein, at 3,005,394 to 3,007,997
_RS15245
ABIE40_RS15250: ABIE40_RS15250 - CatB-related O-acetyltransferase, at 3,008,042 to 3,008,674
_RS15250
ABIE40_RS15255: ABIE40_RS15255 - MBL fold metallo-hydrolase, at 3,008,732 to 3,009,700
_RS15255
ABIE40_RS15260: ABIE40_RS15260 - ABC transporter ATP-binding protein, at 3,010,013 to 3,010,993
_RS15260
Group
Condition
ABIE40
_RS15240
ABIE40
_RS15245
ABIE40
_RS15250
ABIE40
_RS15255
ABIE40
_RS15260
stress
R2A with 1-octen-3-ol 0.904549 mM
-1.1
+0.0
-0.3
+0.1
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.5
+0.0
-0.4
-0.1
-0.2
carbon source
casaminos (C)
+0.4
+0.1
-0.7
-0.3
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.6
+0.1
+0.3
+0.2
-0.1
carbon source
Thymidine (C)
-0.5
+0.6
+0.4
+0.1
-0.5
carbon source
L-Glutamine (C)
-0.2
+0.2
-0.2
+0.4
+0.3
carbon source
D-Raffinose (C)
-0.2
+0.3
-0.1
+0.5
+0.2
stress
R2A with 3-octanone 10.6206 mM
+0.9
+0.1
-0.1
+0.0
-0.3
carbon source
D-Fructose (C)
+0.2
+0.3
-0.3
+0.3
+0.3
carbon source
D-Trehalose (C)
+0.4
+0.3
-0.3
+0.3
+0.1
carbon source
Adenine (C)
+0.3
+0.2
-0.2
+0.3
+0.3
r2a no stress control
R2A no stress control
+0.6
-0.0
+0.4
-0.1
-0.1
carbon source
pyruvate (C)
+0.4
+0.2
-0.3
+0.3
+0.3
carbon source
Formate (C)
+0.5
+0.1
-0.3
+0.3
+0.4
carbon source
L-Asparagine (C)
+0.3
+0.3
-0.2
+0.3
+0.3
carbon source
Trisodium citrate (C)
+0.2
+0.3
-0.1
+0.4
+0.4
carbon source
L-Leucine (C)
+0.7
+0.1
-0.2
+0.3
+0.2
carbon source
D-Glucuronic Acid (C)
+0.3
+0.2
-0.0
+0.5
+0.2
carbon source
Fumarate (C)
+1.0
+0.2
-0.5
+0.3
+0.2
carbon source
L-Lysine (C)
+0.7
+0.2
-0.0
+0.3
+0.2
carbon source
D-Fructose (C)
+0.7
+0.2
-0.1
+0.3
+0.3
carbon source
D-Serine (C)
+0.6
+0.3
-0.0
+0.2
+0.3
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.5
+0.3
+0.1
+0.2
+0.3
carbon source
Glycolic Acid (C)
+0.4
+0.3
+0.1
+0.2
+0.3
carbon source
L-Arabinose (C)
+0.4
+0.3
+0.1
+0.5
+0.1
carbon source
D-Sorbitol (C)
+0.5
+0.2
+0.2
+0.3
+0.2
carbon source
L-Arabinose (C)
+0.8
+0.3
-0.1
+0.3
+0.2
carbon source
Glycolic Acid (C)
+0.7
+0.2
+0.0
+0.3
+0.3
carbon source
L-Tryptophan (C)
+0.4
+0.2
+0.2
+0.4
+0.3
carbon source
L-Threonine (C)
+0.7
+0.2
-0.1
+0.4
+0.3
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