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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS14710 and ABIE40_RS14715 are separated by 5 nucleotides
ABIE40_RS14715 and ABIE40_RS14720 are separated by 475 nucleotides
ABIE40_RS14720 and ABIE40_RS14725 are separated by 102 nucleotides
ABIE40_RS14725 and ABIE40_RS14730 are separated by 3 nucleotides
ABIE40_RS14710: ABIE40_RS14710 - high-affinity branched-chain amino acid ABC transporter permease LivM, at 2,881,826 to 2,883,217
_RS14710
ABIE40_RS14715: ABIE40_RS14715 - branched-chain amino acid ABC transporter permease LivH, at 2,883,223 to 2,884,125
_RS14715
ABIE40_RS14720: ABIE40_RS14720 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,884,601 to 2,885,389
_RS14720
ABIE40_RS14725: ABIE40_RS14725 - DUF2793 domain-containing protein, at 2,885,492 to 2,886,529
_RS14725
ABIE40_RS14730: ABIE40_RS14730 - LuxR C-terminal-related transcriptional regulator, at 2,886,533 to 2,887,279
_RS14730
Group
Condition
ABIE40
_RS14710
ABIE40
_RS14715
ABIE40
_RS14720
ABIE40
_RS14725
ABIE40
_RS14730
carbon source
4-Hydroxybenzoic Acid (C)
-2.5
-3.3
-2.2
+0.1
+0.0
carbon source
4-Hydroxybenzoic Acid (C)
-2.7
-3.1
-1.4
-0.3
-0.3
carbon source
D-Serine (C)
-2.4
-2.5
-1.3
+0.1
+0.1
carbon source
D-Serine (C)
-2.4
-2.0
-0.7
+0.0
+0.1
stress
R2A with 3-octanone 10.6206 mM
-0.4
-0.4
-2.8
-0.4
-0.1
carbon source
D-Sorbitol (C)
-1.6
-1.3
-0.3
-0.3
+0.2
carbon source
D-Glucuronic Acid (C)
-1.9
-1.5
+0.6
-0.3
+0.0
carbon source
D-Sorbitol (C)
-1.2
-1.7
-0.0
-0.2
+0.2
carbon source
D-Glucuronic Acid (C)
-1.7
-1.5
+0.4
-0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-0.2
-1.3
+0.0
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
-0.4
-1.4
+0.5
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.5
-0.1
-1.0
-0.2
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.4
-0.2
-1.1
+0.0
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.5
-0.2
-0.9
-0.1
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
-0.2
-0.8
-0.1
-0.3
stress
R2A with 3-octanone 15.9309 mM
-0.6
+0.0
-0.8
-0.1
-0.3
stress
R2A with 3-octanone 10.6206 mM
-0.1
-0.3
-0.9
-0.0
-0.4
carbon source
succinate (C)
-0.6
-0.4
-0.3
+0.0
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.4
-0.3
-0.8
+0.3
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.5
-0.3
-1.0
+0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
+0.1
-1.0
-0.1
-0.0
dmso control
DMSO control
-0.2
-0.1
-1.0
+0.0
-0.2
stress
R2A with 3-octanone 15.9309 mM
-0.4
+0.0
-0.8
+0.1
-0.4
stress
R2A with 3-octanone 5.3129 mM
-0.4
+0.1
-1.0
+0.0
-0.2
carbon source
L-Lysine (C)
-0.2
-0.3
-1.0
-0.1
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-0.4
-0.8
+0.3
-0.0
r2a no stress control
R2A no stress control
-0.0
+0.2
-1.2
-0.1
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
-0.2
-0.8
+0.3
-0.1
carbon source
L-Alanine (C)
+1.1
+1.0
+1.4
-0.2
+0.3
carbon source
L-Alanine (C)
+1.5
+1.2
+1.9
-0.5
+0.4
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