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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS14100 and ABIE40_RS14105 are separated by 110 nucleotides
ABIE40_RS14105 and ABIE40_RS14110 are separated by 310 nucleotides
ABIE40_RS14110 and ABIE40_RS14115 are separated by 2 nucleotides
ABIE40_RS14115 and ABIE40_RS14120 are separated by 2 nucleotides
ABIE40_RS14100: ABIE40_RS14100 - cold-shock protein, at 2,758,155 to 2,758,445
_RS14100
ABIE40_RS14105: ABIE40_RS14105 - cold-shock protein, at 2,758,556 to 2,758,765
_RS14105
ABIE40_RS14110: ABIE40_RS14110 - cupin domain-containing protein, at 2,759,076 to 2,759,750
_RS14110
ABIE40_RS14115: ABIE40_RS14115 - glucose 1-dehydrogenase, at 2,759,753 to 2,760,496
_RS14115
ABIE40_RS14120: ABIE40_RS14120 - FAD-dependent oxidoreductase, at 2,760,499 to 2,761,613
_RS14120
Group
Condition
ABIE40
_RS14100
ABIE40
_RS14105
ABIE40
_RS14110
ABIE40
_RS14115
ABIE40
_RS14120
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.0
+0.0
+0.2
-0.1
-1.7
carbon source
Fumarate (C)
-0.7
-0.4
-0.3
+0.3
-0.3
carbon source
Gelatin (C)
+0.0
-1.0
-0.2
+0.2
-0.1
carbon source
L-Arabinose (C)
-0.8
+0.1
-0.1
+0.2
-0.5
stress
R2A with 3-octanone 15.9309 mM
+0.2
+0.0
-0.1
-0.3
-0.6
carbon source
L-Alanine (C)
+0.4
-0.4
-0.1
-0.1
-0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.0
-0.1
-0.2
-0.7
carbon source
Thymidine (C)
+0.6
-1.4
+0.2
+0.0
+0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.2
-0.3
-0.1
+0.2
-0.5
stress
R2A with 3-octanone 5.3129 mM
+0.1
+0.3
-0.1
+0.0
-0.8
carbon source
Glycolic Acid (C)
+0.4
-0.6
+0.1
-0.1
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.3
+0.1
-0.0
-0.8
carbon source
water (C)
+0.4
-0.4
+0.2
+0.0
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
+0.3
-0.0
+0.3
-0.8
carbon source
casaminos (C)
-0.2
+0.3
+0.3
-0.4
-0.2
carbon source
D-Lactate (C)
-0.3
+0.2
+0.2
-0.5
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.2
+0.6
-0.1
+0.1
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.6
-0.3
-0.1
+0.1
-0.2
carbon source
Itaconic Acid (C)
-0.4
-0.1
+0.2
+0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.6
+0.1
+0.1
-0.4
stress
R2A with 3-octanone 15.9309 mM
+0.2
+0.5
-0.2
-0.3
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.6
+0.2
-0.0
-0.6
stress
R2A with 3-octanone 10.6206 mM
+0.4
+0.4
-0.1
+0.0
-0.4
carbon source
Itaconic Acid (C)
-0.5
+0.5
+0.2
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
+0.3
+0.4
+0.1
-0.6
carbon source
a-Cyclodextrin (C)
-0.2
+0.5
+0.1
+0.4
-0.3
dmso control
DMSO control
+0.2
+0.7
+0.1
-0.0
-0.3
carbon source
L-Citrulline (C)
+0.2
+0.7
+0.2
-0.0
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.6
+0.8
+0.2
-0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.6
+0.7
+0.0
+0.5
+0.1
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