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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS13840 and ABIE40_RS13845 are separated by 111 nucleotides
ABIE40_RS13845 and ABIE40_RS13850 overlap by 4 nucleotides
ABIE40_RS13850 and ABIE40_RS13855 are separated by 106 nucleotides
ABIE40_RS13855 and ABIE40_RS13860 are separated by 47 nucleotides
ABIE40_RS13840: ABIE40_RS13840 - allantoinase PuuE, at 2,698,656 to 2,699,579
_RS13840
ABIE40_RS13845: ABIE40_RS13845 - AzlD domain-containing protein, at 2,699,691 to 2,699,996
_RS13845
ABIE40_RS13850: ABIE40_RS13850 - AzlC family ABC transporter permease, at 2,699,993 to 2,700,658
_RS13850
ABIE40_RS13855: ABIE40_RS13855 - AraC family transcriptional regulator, at 2,700,765 to 2,701,622
_RS13855
ABIE40_RS13860: ABIE40_RS13860 - DUF1045 domain-containing protein, at 2,701,670 to 2,702,377
_RS13860
Group
Condition
ABIE40
_RS13840
ABIE40
_RS13845
ABIE40
_RS13850
ABIE40
_RS13855
ABIE40
_RS13860
carbon source
Thymidine (C)
-0.4
N.D.
-0.6
-0.4
+0.0
carbon source
casaminos (C)
-0.5
N.D.
-0.3
+0.1
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
N.D.
-0.3
-0.6
+0.2
stress
R2A with 3-octanone 10.6206 mM
-0.5
N.D.
-0.4
-0.5
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.0
N.D.
-0.4
-0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.7
N.D.
-0.0
-0.2
+0.0
stress
R2A with 3-octanone 15.9309 mM
-0.2
N.D.
-0.7
-0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
N.D.
-0.3
-0.5
+0.5
carbon source
D-Sorbitol (C)
+0.0
N.D.
+0.2
-0.2
-0.7
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
N.D.
+0.3
-0.4
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
N.D.
-0.5
-0.4
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.5
N.D.
+0.1
-0.4
+0.3
stress
R2A with 3-octanone 15.9309 mM
-0.6
N.D.
+0.1
-0.1
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
N.D.
-0.1
-0.3
+0.3
carbon source
L-Threonine (C)
+0.1
N.D.
+0.4
-0.3
-0.5
carbon source
Glycolic Acid (C)
+0.0
N.D.
+0.4
-0.0
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.4
N.D.
+0.2
-0.1
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
N.D.
-0.1
-0.2
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.0
N.D.
-0.2
-0.3
+0.5
stress
R2A with 3-octanone 5.3129 mM
-0.3
N.D.
+0.2
-0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
N.D.
-0.0
-0.1
+0.6
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
N.D.
+0.4
-0.0
+0.2
carbon source
D-Lactate (C)
-0.3
N.D.
+0.2
-0.3
+0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
N.D.
+0.4
-0.1
+0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
N.D.
+0.1
-0.2
+0.5
stress
R2A with 3-octanone 10.6206 mM
-0.3
N.D.
+0.2
+0.1
+0.3
carbon source
Ethanol (C)
-0.1
N.D.
+0.5
-0.1
+0.2
carbon source
L-Arabinose (C)
+0.3
N.D.
+0.1
-0.3
+0.3
carbon source
D-Trehalose (C)
+0.2
N.D.
+0.6
-0.1
-0.0
carbon source
L-Citrulline (C)
-0.2
N.D.
+0.4
+0.3
+0.5
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