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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS13490 and ABIE40_RS13495 are separated by 237 nucleotides
ABIE40_RS13495 and ABIE40_RS13500 are separated by 76 nucleotides
ABIE40_RS13500 and ABIE40_RS13505 overlap by 4 nucleotides
ABIE40_RS13505 and ABIE40_RS13510 are separated by 32 nucleotides
ABIE40_RS13490: ABIE40_RS13490 - thymidine kinase, at 2,630,995 to 2,631,597
_RS13490
ABIE40_RS13495: ABIE40_RS13495 - choline ABC transporter substrate-binding protein, at 2,631,835 to 2,632,791
_RS13495
ABIE40_RS13500: ABIE40_RS13500 - choline ABC transporter permease subunit, at 2,632,868 to 2,633,713
_RS13500
ABIE40_RS13505: ABIE40_RS13505 - choline ABC transporter ATP-binding protein, at 2,633,710 to 2,634,762
_RS13505
ABIE40_RS13510: ABIE40_RS13510 - 'pyridoxamine 5'-phosphate oxidase family protein' pseudo=_no_value transl_table=11, at 2,634,795 to 2,635,549
_RS13510
Group
Condition
ABIE40
_RS13490
ABIE40
_RS13495
ABIE40
_RS13500
ABIE40
_RS13505
ABIE40
_RS13510
carbon source
L-Aspartic Acid (C)
-0.2
-0.1
-0.5
+0.0
-0.4
carbon source
Thymidine (C)
-0.3
+0.3
-0.5
-0.3
-0.5
carbon source
Adenine (C)
-0.2
+0.0
-0.5
-0.1
-0.3
carbon source
D-Fructose (C)
-0.0
-0.1
-0.7
-0.1
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.1
-0.4
-0.3
-0.1
carbon source
L-Glutamine (C)
-0.1
-0.1
-0.2
-0.3
-0.2
carbon source
pyruvate (C)
-0.1
+0.0
-0.3
-0.3
-0.3
carbon source
D-Trehalose (C)
-0.3
-0.1
-0.2
-0.2
-0.0
carbon source
Gelatin (C)
-0.2
+0.2
-0.3
-0.2
-0.3
carbon source
water (C)
+0.1
-0.1
-0.4
-0.3
-0.1
stress
R2A with 3-octanone 5.3129 mM
-0.3
+0.0
-0.2
+0.1
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-0.2
-0.3
+0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-0.0
-0.3
+0.3
-0.3
carbon source
Glycolic Acid (C)
+0.2
-0.0
-0.3
-0.2
-0.2
carbon source
D-Raffinose (C)
+0.2
-0.3
-0.1
-0.1
-0.2
carbon source
Carnitine Hydrochloride (C)
+0.2
-0.0
-0.4
+0.1
-0.2
carbon source
L-Alanine (C)
-0.0
+0.1
+0.2
-0.3
-0.3
carbon source
succinate (C)
+0.3
+0.0
-0.5
+0.3
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.0
-0.2
+0.2
+0.2
-0.4
carbon source
L-Threonine (C)
-0.2
+0.3
+0.2
-0.2
-0.3
stress
R2A with 3-octanone 15.9309 mM
+0.2
+0.1
+0.2
-0.2
-0.2
dmso control
DMSO control
-0.2
+0.2
+0.2
+0.1
-0.2
stress
R2A with 3-octanone 10.6206 mM
-0.4
+0.1
+0.5
+0.2
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.2
+0.0
+0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.6
+0.3
+0.3
+0.6
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
-0.0
+0.3
+0.5
+0.1
carbon source
L-Alanine (C)
-0.1
+0.4
+0.2
+0.2
-0.1
stress
R2A with 3-octanone 10.6206 mM
-0.1
-0.0
+0.4
+0.3
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.2
+0.2
+0.3
+0.4
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
-0.0
+0.4
+0.3
+0.2
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