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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS13480 and ABIE40_RS13485 overlap by 4 nucleotides
ABIE40_RS13485 and ABIE40_RS13490 are separated by 65 nucleotides
ABIE40_RS13490 and ABIE40_RS13495 are separated by 237 nucleotides
ABIE40_RS13495 and ABIE40_RS13500 are separated by 76 nucleotides
ABIE40_RS13480: ABIE40_RS13480 - LysR substrate-binding domain-containing protein, at 2,628,978 to 2,629,859
_RS13480
ABIE40_RS13485: ABIE40_RS13485 - hypothetical protein, at 2,629,856 to 2,630,929
_RS13485
ABIE40_RS13490: ABIE40_RS13490 - thymidine kinase, at 2,630,995 to 2,631,597
_RS13490
ABIE40_RS13495: ABIE40_RS13495 - choline ABC transporter substrate-binding protein, at 2,631,835 to 2,632,791
_RS13495
ABIE40_RS13500: ABIE40_RS13500 - choline ABC transporter permease subunit, at 2,632,868 to 2,633,713
_RS13500
Group
Condition
ABIE40
_RS13480
ABIE40
_RS13485
ABIE40
_RS13490
ABIE40
_RS13495
ABIE40
_RS13500
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.6
-0.4
-0.2
-0.3
carbon source
L-Aspartic Acid (C)
-0.2
-0.1
-0.2
-0.1
-0.5
carbon source
Adenine (C)
-0.2
-0.3
-0.2
+0.0
-0.5
carbon source
Thymidine (C)
-0.3
-0.3
-0.3
+0.3
-0.5
stress
R2A with 3-octanone 5.3129 mM
+0.1
-0.4
-0.3
+0.0
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.4
-0.9
-0.1
+0.0
-0.1
carbon source
L-Tryptophan (C)
-0.3
+0.3
-0.1
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.5
-0.5
-0.3
-0.0
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.6
-0.3
-0.1
+0.2
carbon source
casaminos (C)
-0.9
+0.5
+0.1
-0.1
-0.0
r2a no stress control
R2A no stress control
+0.3
-0.6
-0.1
+0.1
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.5
-0.6
+0.0
-0.0
+0.0
carbon source
L-Threonine (C)
-0.2
-0.3
-0.2
+0.3
+0.2
dmso control
DMSO control
+0.4
-0.6
-0.2
+0.2
+0.2
stress
R2A with 3-octanone 5.3129 mM
+0.3
-0.6
-0.2
-0.0
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
-0.3
-0.3
-0.0
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
-0.6
-0.0
-0.0
+0.2
carbon source
succinate (C)
-0.0
+0.3
+0.3
+0.0
-0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.4
-0.3
+0.2
+0.0
-0.2
stress
R2A with 3-octanone 5.3129 mM
+0.4
-0.3
+0.1
-0.2
+0.2
stress
R2A with 3-octanone 10.6206 mM
+0.4
-0.4
-0.4
+0.1
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
-0.1
-0.6
+0.3
+0.3
r2a no stress control
R2A no stress control
+0.2
-0.4
+0.1
+0.1
+0.3
carbon source
4-Hydroxybenzoic Acid (C)
-0.2
+0.3
+0.2
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.3
-0.3
-0.2
+0.2
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.6
-0.4
-0.1
+0.0
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.5
-0.2
-0.2
-0.0
+0.4
carbon source
D-Lactate (C)
+0.4
+0.7
-0.1
+0.0
-0.1
carbon source
Glycolic Acid (C)
+1.4
+0.2
-0.2
-0.2
+0.0
carbon source
Glycolic Acid (C)
+1.6
-0.1
+0.2
-0.0
-0.3
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