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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS12955 and ABIE40_RS12960 are separated by 178 nucleotides
ABIE40_RS12960 and ABIE40_RS12965 are separated by 57 nucleotides
ABIE40_RS12965 and ABIE40_RS12970 are separated by 260 nucleotides
ABIE40_RS12970 and ABIE40_RS12975 are separated by 278 nucleotides
ABIE40_RS12955: ABIE40_RS12955 - cold-shock protein, at 2,530,490 to 2,530,705
_RS12955
ABIE40_RS12960: ABIE40_RS12960 - BA14K family protein, at 2,530,884 to 2,531,300
_RS12960
ABIE40_RS12965: ABIE40_RS12965 - MBL fold metallo-hydrolase, at 2,531,358 to 2,532,002
_RS12965
ABIE40_RS12970: ABIE40_RS12970 - DUF1236 domain-containing protein, at 2,532,263 to 2,532,880
_RS12970
ABIE40_RS12975: ABIE40_RS12975 - MarR family transcriptional regulator, at 2,533,159 to 2,533,677
_RS12975
Group
Condition
ABIE40
_RS12955
ABIE40
_RS12960
ABIE40
_RS12965
ABIE40
_RS12970
ABIE40
_RS12975
carbon source
D-Glucose-6-Phosphate (C)
-0.8
-0.1
-0.0
+0.1
-0.7
stress
R2A with 3-octanone 10.6206 mM
-0.6
+0.2
+0.1
+0.2
-0.8
carbon source
L-Citrulline (C)
-0.1
-0.3
+0.2
+0.2
-0.8
stress
R2A with 3-octanone 5.3129 mM
+0.4
+0.2
+0.1
+0.1
-0.8
dmso control
DMSO control
+0.5
+0.0
+0.2
+0.2
-0.6
carbon source
D-Fructose (C)
+0.9
-0.2
+0.2
+0.1
-0.6
stress
R2A with 3-octanone 15.9309 mM
+0.5
+0.2
+0.1
+0.2
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.6
+0.3
+0.3
+0.2
-0.5
stress
R2A with 3-octanone 15.9309 mM
+0.5
+0.4
+0.2
+0.3
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.6
+0.3
+0.2
+0.3
-0.4
stress
R2A with 3-octanone 10.6206 mM
+1.1
-0.0
+0.3
+0.2
-0.5
carbon source
4-Hydroxybenzoic Acid (C)
+1.3
+0.3
+0.1
+0.1
-0.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+1.0
+0.3
+0.0
+0.3
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.7
+0.3
+0.1
+0.3
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.9
+0.2
+0.1
+0.3
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
+0.3
+0.3
+0.4
-0.4
carbon source
4-Hydroxybenzoic Acid (C)
+1.5
+0.2
-0.0
-0.0
-0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+1.1
+0.3
+0.2
+0.1
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
+1.0
+0.1
+0.2
+0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.6
+0.3
+0.2
+0.4
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.7
+0.4
+0.3
+0.4
-0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.7
+0.4
+0.3
+0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.9
+0.3
+0.3
+0.4
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
+0.3
+0.2
+0.5
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+1.1
+0.3
+0.2
+0.4
-0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.7
+0.4
+0.3
+0.4
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.8
+0.4
+0.4
+0.4
-0.3
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+2.4
+0.1
+0.1
+0.2
-1.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+2.0
-0.1
+0.2
+0.1
-0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.8
+0.4
+0.2
+0.5
-0.0
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