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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS12230 and ABIE40_RS12235 are separated by 21 nucleotides
ABIE40_RS12235 and ABIE40_RS12240 are separated by 124 nucleotides
ABIE40_RS12240 and ABIE40_RS12245 are separated by 479 nucleotides
ABIE40_RS12245 and ABIE40_RS12250 overlap by 1 nucleotides
ABIE40_RS12230: ABIE40_RS12230 - carboxymuconolactone decarboxylase family protein, at 2,381,875 to 2,382,216
_RS12230
ABIE40_RS12235: ABIE40_RS12235 - MBL fold metallo-hydrolase, at 2,382,238 to 2,383,155
_RS12235
ABIE40_RS12240: ABIE40_RS12240 - alpha/beta hydrolase, at 2,383,280 to 2,384,104
_RS12240
ABIE40_RS12245: ABIE40_RS12245 - PAS domain-containing protein, at 2,384,584 to 2,386,647
_RS12245
ABIE40_RS12250: ABIE40_RS12250 - response regulator, at 2,386,647 to 2,387,282
_RS12250
Group
Condition
ABIE40
_RS12230
ABIE40
_RS12235
ABIE40
_RS12240
ABIE40
_RS12245
ABIE40
_RS12250
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-4.2
-0.0
+0.0
-0.4
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-3.9
-0.2
+0.0
-0.2
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-3.9
+0.0
+0.3
+0.0
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-3.0
-0.2
+0.1
-0.2
-0.7
stress
R2A with 3-octanone 10.6206 mM
-4.0
+0.2
+0.2
-0.1
+0.1
carbon source
Gelatin (C)
-3.3
-0.2
+0.1
-0.2
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
-2.5
-0.2
-0.1
-0.3
+0.0
carbon source
L-Threonine (C)
-2.7
+0.0
-0.0
+0.0
+0.1
stress
R2A with 3-octanone 15.9309 mM
-2.5
+0.2
+0.1
+0.0
-0.5
stress
R2A with 3-octanone 15.9309 mM
-1.7
-0.1
+0.2
-0.2
-0.5
carbon source
L-Citrulline (C)
-1.5
-0.3
-0.2
-0.0
-0.1
r2a no stress control
R2A no stress control
-2.1
-0.0
+0.4
-0.0
-0.1
carbon source
L-Arabinose (C)
-1.2
-0.2
+0.1
+0.0
-0.5
stress
R2A with 3-octanone 10.6206 mM
-0.9
-0.2
+0.0
-0.2
-0.5
carbon source
D-Lactate (C)
-1.1
-0.2
+0.1
+0.0
-0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
-1.9
+0.2
+0.2
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.1
-0.1
+0.1
-0.2
-0.2
stress
R2A with 3-octanone 10.6206 mM
-1.1
+0.1
+0.1
-0.2
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
-0.1
+0.1
-0.3
-0.6
carbon source
Adenosine (C)
-1.2
+0.1
+0.1
-0.2
+0.2
carbon source
casaminos (C)
-1.1
-0.2
+0.1
-0.0
+0.2
carbon source
Gelatin (C)
-1.2
+0.0
+0.1
-0.1
+0.3
carbon source
pyruvate (C)
-1.1
+0.1
-0.0
-0.1
+0.3
carbon source
D-Raffinose (C)
-1.2
+0.3
+0.1
-0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.5
-0.2
+0.2
-0.4
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+1.0
-0.1
+0.3
-0.2
-0.3
carbon source
D-Glucose (C)
+0.9
-0.2
+0.0
-0.0
+0.2
carbon source
Glycolic Acid (C)
+1.2
-0.1
+0.2
-0.1
-0.0
carbon source
Fumarate (C)
+1.1
-0.2
+0.2
+0.0
+0.4
carbon source
casaminos (C)
+1.8
+0.1
-0.1
-0.0
-0.3
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