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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS12135 and ABIE40_RS12140 are separated by 173 nucleotides
ABIE40_RS12140 and ABIE40_RS12145 are separated by 42 nucleotides
ABIE40_RS12145 and ABIE40_RS12150 are separated by 101 nucleotides
ABIE40_RS12150 and ABIE40_RS12155 are separated by 102 nucleotides
ABIE40_RS12135: ABIE40_RS12135 - methionine synthase, at 2,365,415 to 2,369,188
_RS12135
ABIE40_RS12140: ABIE40_RS12140 - AGE family epimerase/isomerase, at 2,369,362 to 2,370,621
_RS12140
ABIE40_RS12145: ABIE40_RS12145 - heme-degrading domain-containing protein, at 2,370,664 to 2,371,152
_RS12145
ABIE40_RS12150: ABIE40_RS12150 - DUF4174 domain-containing protein, at 2,371,254 to 2,371,655
_RS12150
ABIE40_RS12155: ABIE40_RS12155 - hypothetical protein, at 2,371,758 to 2,372,141
_RS12155
Group
Condition
ABIE40
_RS12135
ABIE40
_RS12140
ABIE40
_RS12145
ABIE40
_RS12150
ABIE40
_RS12155
carbon source
L-Leucine (C)
-3.8
-5.1
-0.3
-0.1
-0.1
carbon source
L-Leucine (C)
-3.8
-4.5
-0.1
-0.3
-0.0
carbon source
L-Lysine (C)
-3.8
-0.1
+0.2
-1.3
-0.0
carbon source
L-Citrulline (C)
-3.5
-0.4
-0.3
-0.7
+0.0
carbon source
Adenine (C)
-3.9
-0.1
+0.0
-0.4
-0.5
carbon source
L-Asparagine (C)
-3.8
-0.1
-0.1
-0.2
-0.5
carbon source
D-Glucose (C)
-4.0
-0.2
+0.0
-0.3
-0.2
carbon source
Carnitine Hydrochloride (C)
-3.9
-0.1
-0.1
-0.2
-0.3
carbon source
Gelatin (C)
-4.0
-0.3
-0.0
-0.1
-0.3
carbon source
water (C)
-3.8
-0.2
-0.1
-0.3
-0.2
carbon source
Adenosine (C)
-4.0
-0.3
+0.1
+0.0
-0.3
carbon source
D-Trehalose (C)
-4.0
-0.2
-0.1
+0.0
-0.3
carbon source
L-Arabinose (C)
-3.7
-0.1
+0.2
-0.3
-0.5
carbon source
D-Glucose (C)
-3.8
-0.0
+0.0
-0.5
-0.2
carbon source
L-Aspartic Acid (C)
-4.0
-0.2
+0.1
-0.1
-0.2
carbon source
casaminos (C)
-3.9
-0.1
+0.1
-0.4
-0.0
carbon source
L-Lysine (C)
-3.9
-0.2
+0.2
+0.0
-0.3
carbon source
L-Glutamine (C)
-3.9
+0.2
-0.3
+0.0
+0.1
carbon source
D-Sorbitol (C)
-3.8
-0.2
-0.1
-0.2
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
-3.7
-0.5
+0.2
+0.2
-0.0
carbon source
Thymidine (C)
-3.4
-0.5
+0.3
-0.5
+0.3
carbon source
L-Methionine (C)
-3.9
-0.2
+0.1
+0.3
+0.0
carbon source
Formate (C)
-3.9
-0.1
+0.1
+0.5
-0.2
carbon source
Trisodium citrate (C)
-3.7
-0.2
+0.2
-0.2
+0.3
carbon source
D-Serine (C)
-3.8
-0.1
+0.2
-0.2
+0.3
carbon source
L-Tryptophan (C)
-3.7
+0.1
+0.3
-0.4
+0.1
carbon source
L-Threonine (C)
-3.9
+0.3
+0.3
+0.0
-0.2
carbon source
D-Glucuronic Acid (C)
-3.9
-0.2
+0.0
+0.1
+0.6
carbon source
D-Serine (C)
-3.9
-0.1
+0.2
+0.2
+0.4
carbon source
D-Glucuronic Acid (C)
-3.8
-0.2
-0.2
+0.5
+0.5
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