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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS12080 and ABIE40_RS12085 are separated by 82 nucleotides
ABIE40_RS12085 and ABIE40_RS12090 are separated by 11 nucleotides
ABIE40_RS12090 and ABIE40_RS12095 overlap by 4 nucleotides
ABIE40_RS12095 and ABIE40_RS12100 are separated by 10 nucleotides
ABIE40_RS12080: ABIE40_RS12080 - MFS transporter, at 2,354,778 to 2,356,121
_RS12080
ABIE40_RS12085: ABIE40_RS12085 - ATP-binding cassette domain-containing protein, at 2,356,204 to 2,357,205
_RS12085
ABIE40_RS12090: ABIE40_RS12090 - Gfo/Idh/MocA family oxidoreductase, at 2,357,217 to 2,358,281
_RS12090
ABIE40_RS12095: ABIE40_RS12095 - carbohydrate ABC transporter permease, at 2,358,278 to 2,359,120
_RS12095
ABIE40_RS12100: ABIE40_RS12100 - sugar ABC transporter permease, at 2,359,131 to 2,360,075
_RS12100
Group
Condition
ABIE40
_RS12080
ABIE40
_RS12085
ABIE40
_RS12090
ABIE40
_RS12095
ABIE40
_RS12100
carbon source
D-Trehalose (C)
-0.1
-3.9
-3.1
-3.8
-4.0
carbon source
D-Trehalose (C)
+0.0
-3.4
-3.3
-4.1
-3.8
carbon source
L-Threonine (C)
-0.0
-0.7
-0.5
-0.5
-0.5
carbon source
L-Threonine (C)
+0.1
-0.7
-0.3
-0.7
-0.2
stress
R2A with 3-octanone 15.9309 mM
-0.1
-0.1
+0.1
-0.7
-0.5
carbon source
Thymidine (C)
-0.1
-0.3
-0.4
+0.2
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.0
+0.4
-0.1
-0.6
-0.5
stress
R2A with 3-octanone 10.6206 mM
-0.0
+0.3
-0.2
-0.4
-0.3
carbon source
D-Galactose (C)
-0.1
-0.2
-0.2
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.2
+0.0
-0.5
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.3
+0.0
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.0
+0.2
-0.1
-0.5
+0.2
carbon source
L-Lysine (C)
-0.1
-0.3
-0.1
+0.1
+0.3
carbon source
D-Fructose (C)
-0.1
-0.4
-0.0
+0.3
+0.1
carbon source
D-Lactate (C)
-0.1
-0.1
-0.3
+0.3
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.0
+0.3
+0.1
-0.1
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.1
+0.2
-0.3
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.0
+0.4
+0.1
-0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.0
+0.4
+0.1
-0.3
-0.2
stress
R2A with 3-octanone 5.3129 mM
+0.1
+0.2
-0.1
+0.2
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
+0.4
+0.2
-0.2
-0.2
dmso control
DMSO control
-0.1
+0.2
+0.1
+0.3
-0.2
carbon source
a-Cyclodextrin (C)
+0.1
-0.1
-0.2
+0.2
+0.3
r2a no stress control
R2A no stress control
+0.1
+0.3
+0.2
-0.5
+0.2
stress
R2A with 3-octanone 5.3129 mM
-0.1
+0.4
+0.3
-0.2
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.3
+0.1
-0.2
-0.0
r2a no stress control
R2A no stress control
-0.2
+0.4
+0.1
+0.4
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.7
+0.1
-0.0
-0.1
carbon source
succinate (C)
-0.1
+0.2
+0.1
+0.2
+0.6
stress
R2A with 3-octanone 10.6206 mM
+0.2
+0.5
+0.2
+0.4
-0.2
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