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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS10935 and ABIE40_RS10940 overlap by 4 nucleotides
ABIE40_RS10940 and ABIE40_RS10945 overlap by 8 nucleotides
ABIE40_RS10945 and ABIE40_RS10950 are separated by 100 nucleotides
ABIE40_RS10950 and ABIE40_RS10955 are separated by 91 nucleotides
ABIE40_RS10935: ABIE40_RS10935 - Fur family transcriptional regulator, at 2,120,718 to 2,121,116
_RS10935
ABIE40_RS10940: ABIE40_RS10940 - zinc ABC transporter permease subunit ZnuB, at 2,121,113 to 2,121,925
_RS10940
ABIE40_RS10945: ABIE40_RS10945 - metal ABC transporter ATP-binding protein, at 2,121,918 to 2,122,808
_RS10945
ABIE40_RS10950: ABIE40_RS10950 - zinc ABC transporter substrate-binding protein ZnuA, at 2,122,909 to 2,123,892
_RS10950
ABIE40_RS10955: ABIE40_RS10955 - zinc metallochaperone GTPase ZigA, at 2,123,984 to 2,125,189
_RS10955
Group
Condition
ABIE40
_RS10935
ABIE40
_RS10940
ABIE40
_RS10945
ABIE40
_RS10950
ABIE40
_RS10955
carbon source
Fumarate (C)
-4.2
-0.3
+0.0
+0.0
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-3.7
+0.5
+0.2
-0.3
-0.1
carbon source
Formate (C)
-1.4
-1.1
-0.7
-0.0
-0.0
carbon source
Formate (C)
-2.4
-0.2
-0.4
-0.2
+0.1
carbon source
L-Aspartic Acid (C)
-1.0
-0.4
-0.2
-0.2
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
-1.3
-0.1
-0.2
+0.1
-0.4
r2a no stress control
R2A no stress control
-2.0
+0.5
-0.1
-0.2
+0.1
carbon source
Adenine (C)
-1.1
-0.6
-0.0
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-2.0
+0.3
-0.2
-0.1
+0.4
carbon source
Ethanol (C)
-1.6
+0.3
+0.1
-0.0
-0.2
stress
R2A with 3-octanone 10.6206 mM
-2.3
+0.6
-0.1
-0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-2.2
+0.5
+0.3
-0.1
+0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-1.1
-0.4
+0.2
+0.0
-0.1
carbon source
L-Threonine (C)
-1.3
-0.2
+0.1
+0.1
+0.1
carbon source
D-Trehalose (C)
-1.2
-0.3
+0.2
+0.0
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.5
+0.4
+0.1
-0.2
+0.1
stress
R2A with 3-octanone 5.3129 mM
-2.8
+0.8
+0.5
-0.0
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.3
+0.3
-0.0
-0.3
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-1.2
-0.1
+0.3
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.6
+0.3
+0.3
-0.2
+0.4
stress
R2A with 3-octanone 5.3129 mM
-1.4
+0.3
-0.0
+0.2
+0.3
stress
R2A with 3-octanone 5.3129 mM
-1.2
+0.1
+0.2
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.6
+0.5
+0.1
-0.1
+0.5
dmso control
DMSO control
-0.9
+0.4
-0.0
-0.2
+0.3
stress
R2A with 3-octanone 5.3129 mM
-1.0
+0.2
+0.3
-0.1
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.0
+0.6
+0.4
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.1
+0.5
+0.1
+0.1
+0.5
carbon source
L-Alanine (C)
+0.7
-0.9
+0.4
+0.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
+0.4
+0.2
-0.1
+0.5
carbon source
casaminos (C)
+0.8
+1.3
+0.8
+0.0
-0.3
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