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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS10030 and ABIE40_RS10035 are separated by 50 nucleotides
ABIE40_RS10035 and ABIE40_RS10040 are separated by 117 nucleotides
ABIE40_RS10040 and ABIE40_RS10045 overlap by 4 nucleotides
ABIE40_RS10045 and ABIE40_RS10050 are separated by 101 nucleotides
ABIE40_RS10030: ABIE40_RS10030 - tyrosine--tRNA ligase, at 1,930,188 to 1,931,444
_RS10030
ABIE40_RS10035: ABIE40_RS10035 - DUF3971 domain-containing protein, at 1,931,495 to 1,934,896
_RS10035
ABIE40_RS10040: ABIE40_RS10040 - peroxiredoxin, at 1,935,014 to 1,935,487
_RS10040
ABIE40_RS10045: ABIE40_RS10045 - ferritin-like domain-containing protein, at 1,935,484 to 1,936,308
_RS10045
ABIE40_RS10050: ABIE40_RS10050 - M23 family metallopeptidase, at 1,936,410 to 1,937,717
_RS10050
Group
Condition
ABIE40
_RS10030
ABIE40
_RS10035
ABIE40
_RS10040
ABIE40
_RS10045
ABIE40
_RS10050
carbon source
casaminos (C)
N.D.
-4.1
-0.0
-0.2
-0.2
carbon source
Fumarate (C)
N.D.
-2.3
-0.0
-0.1
-0.5
carbon source
L-Tryptophan (C)
N.D.
-2.6
+0.2
+0.2
+0.1
carbon source
Thymidine (C)
N.D.
-1.3
-0.1
-0.3
-0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-1.2
-0.0
-0.4
-0.2
stress
R2A with 3-octanone 15.9309 mM
N.D.
-0.9
-0.3
-0.4
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-1.1
-0.3
-0.3
-0.1
carbon source
D-Fructose (C)
N.D.
-1.7
+0.0
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
-1.4
+0.1
-0.1
-0.4
r2a no stress control
R2A no stress control
N.D.
-1.3
+0.0
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
-1.1
-0.1
-0.3
-0.3
stress
R2A with 3-octanone 10.6206 mM
N.D.
-1.3
-0.2
-0.2
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
-1.2
+0.1
-0.3
-0.3
carbon source
L-Tryptophan (C)
N.D.
-2.6
+0.5
+0.4
+0.1
carbon source
L-Arabinose (C)
N.D.
-1.4
+0.2
-0.2
-0.3
carbon source
D-Glucose (C)
N.D.
-1.6
+0.1
+0.2
-0.3
carbon source
L-Lysine (C)
N.D.
-1.2
+0.0
-0.1
-0.3
carbon source
a-Cyclodextrin (C)
N.D.
-1.5
+0.1
-0.0
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-1.1
+0.2
-0.4
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-1.2
+0.1
-0.1
-0.3
r2a no stress control
R2A no stress control
N.D.
-1.1
+0.1
-0.1
-0.4
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
N.D.
-1.8
+0.1
+0.2
+0.1
carbon source
Carnitine Hydrochloride (C)
N.D.
-1.6
+0.3
+0.0
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-1.1
+0.2
-0.1
-0.4
stress
R2A with 3-octanone 5.3129 mM
N.D.
-1.2
+0.2
-0.0
-0.4
dmso control
DMSO control
N.D.
-1.4
+0.2
-0.1
-0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-1.0
+0.3
-0.3
-0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-1.2
+0.5
-0.2
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
-1.1
+0.0
+0.2
-0.4
stress
R2A with 3-octanone 10.6206 mM
N.D.
-1.0
+0.4
-0.1
-0.3
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