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Gene
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Cofit
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS09755 and ABIE40_RS09760 are separated by 381 nucleotides
ABIE40_RS09760 and ABIE40_RS09765 are separated by 222 nucleotides
ABIE40_RS09765 and ABIE40_RS09770 are separated by 121 nucleotides
ABIE40_RS09770 and ABIE40_RS09775 are separated by 112 nucleotides
ABIE40_RS09755: ABIE40_RS09755 - alpha/beta fold hydrolase, at 1,881,723 to 1,882,556
_RS09755
ABIE40_RS09760: ABIE40_RS09760 - transglutaminase-like cysteine peptidase, at 1,882,938 to 1,883,537
_RS09760
ABIE40_RS09765: ABIE40_RS09765 - hypothetical protein, at 1,883,760 to 1,884,538
_RS09765
ABIE40_RS09770: ABIE40_RS09770 - D-alanyl-D-alanine carboxypeptidase, at 1,884,660 to 1,886,171
_RS09770
ABIE40_RS09775: ABIE40_RS09775 - hypothetical protein, at 1,886,284 to 1,886,562
_RS09775
Group
Condition
ABIE40
_RS09755
ABIE40
_RS09760
ABIE40
_RS09765
ABIE40
_RS09770
ABIE40
_RS09775
carbon source
L-Lysine (C)
+0.4
-0.0
-0.3
-3.7
N.D.
carbon source
casaminos (C)
-0.0
+0.2
+0.2
-3.3
N.D.
carbon source
L-Lysine (C)
+0.6
-0.0
-0.3
-3.0
N.D.
carbon source
Trisodium citrate (C)
+0.3
-0.5
-0.4
-2.1
N.D.
carbon source
L-Arabinose (C)
-0.1
-0.1
-0.4
-2.0
N.D.
carbon source
L-Arabinose (C)
+0.6
-0.0
-0.5
-2.5
N.D.
carbon source
casaminos (C)
+0.5
+0.3
-0.1
-2.9
N.D.
carbon source
L-Aspartic Acid (C)
-0.2
-0.5
-0.1
-1.2
N.D.
carbon source
Carnitine Hydrochloride (C)
+0.3
-0.1
-0.1
-1.8
N.D.
carbon source
D-Lactate (C)
-0.2
-0.4
-0.3
-0.5
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
+0.0
-0.1
-1.4
N.D.
carbon source
Carnitine Hydrochloride (C)
+0.1
-0.0
-0.2
-1.0
N.D.
stress
R2A with 3-octanone 10.6206 mM
-0.2
+0.1
+0.1
-0.9
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.2
-0.1
+0.5
-1.1
N.D.
carbon source
L-Leucine (C)
+0.3
-0.2
-0.1
-0.7
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
-0.3
+0.3
-0.9
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
-0.2
+0.2
-0.6
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.4
-0.6
+0.2
-0.3
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
-0.6
+0.3
+0.3
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.5
-0.0
+0.1
-0.6
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.4
-0.3
+0.2
-0.4
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.6
+0.2
-0.1
-0.4
N.D.
stress
R2A with 3-octanone 10.6206 mM
+0.5
+0.1
+0.5
-0.6
N.D.
stress
R2A with 3-octanone 10.6206 mM
+0.9
+0.3
+0.3
-1.0
N.D.
carbon source
L-Glutamine (C)
+0.1
+0.3
-0.3
+0.7
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.2
+0.5
-0.1
+0.6
N.D.
carbon source
Thymidine (C)
+0.8
+0.2
+0.0
-0.2
N.D.
carbon source
L-Asparagine (C)
+0.5
+0.3
-0.1
+0.4
N.D.
carbon source
L-Asparagine (C)
+0.6
+0.9
-0.2
+0.1
N.D.
carbon source
Fumarate (C)
+0.6
+0.2
-0.0
+0.7
N.D.
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