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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS09220 and ABIE40_RS09225 are separated by 48 nucleotides
ABIE40_RS09225 and ABIE40_RS09230 are separated by 246 nucleotides
ABIE40_RS09230 and ABIE40_RS09235 are separated by 10 nucleotides
ABIE40_RS09235 and ABIE40_RS09240 are separated by 46 nucleotides
ABIE40_RS09220: ABIE40_RS09220 - GntR family transcriptional regulator, at 1,774,442 to 1,775,056
_RS09220
ABIE40_RS09225: ABIE40_RS09225 - ferredoxin--NADP reductase, at 1,775,105 to 1,775,917
_RS09225
ABIE40_RS09230: ABIE40_RS09230 - phosphatidylcholine synthase, at 1,776,164 to 1,776,892
_RS09230
ABIE40_RS09235: ABIE40_RS09235 - quinone oxidoreductase, at 1,776,903 to 1,777,883
_RS09235
ABIE40_RS09240: ABIE40_RS09240 - ABC transporter ATP-binding protein, at 1,777,930 to 1,779,504
_RS09240
Group
Condition
ABIE40
_RS09220
ABIE40
_RS09225
ABIE40
_RS09230
ABIE40
_RS09235
ABIE40
_RS09240
stress
R2A with 3-octanone 15.9309 mM
N.D.
N.D.
-0.7
-0.3
-0.0
stress
R2A with 3-octanone 10.6206 mM
N.D.
N.D.
-0.8
-0.1
-0.0
carbon source
Thymidine (C)
N.D.
N.D.
-0.2
-0.2
-0.4
stress
R2A with 3-octanone 10.6206 mM
N.D.
N.D.
-0.4
-0.4
+0.2
r2a no stress control
R2A no stress control
N.D.
N.D.
-0.3
-0.3
-0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
+0.1
-0.2
-0.2
stress
R2A with 3-octanone 10.6206 mM
N.D.
N.D.
-0.4
-0.1
+0.2
carbon source
L-Tryptophan (C)
N.D.
N.D.
+0.2
-0.2
-0.3
carbon source
casaminos (C)
N.D.
N.D.
+0.2
-0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
N.D.
+0.3
-0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
N.D.
+0.3
-0.2
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
+0.3
-0.1
-0.2
stress
R2A with 3-octanone 15.9309 mM
N.D.
N.D.
-0.4
-0.0
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
N.D.
+0.3
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
N.D.
+0.2
-0.3
+0.2
carbon source
Itaconic Acid (C)
N.D.
N.D.
+0.4
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
N.D.
+0.2
-0.2
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
+0.4
-0.3
+0.2
carbon source
L-Leucine (C)
N.D.
N.D.
+0.4
-0.2
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
+0.2
-0.2
+0.3
carbon source
D-Lactate (C)
N.D.
N.D.
+0.4
-0.3
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
+0.4
-0.2
+0.0
carbon source
Formate (C)
N.D.
N.D.
+0.5
-0.1
+0.1
carbon source
L-Alanine (C)
N.D.
N.D.
+0.8
-0.1
-0.3
carbon source
L-Aspartic Acid (C)
N.D.
N.D.
+0.4
+0.1
+0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
N.D.
N.D.
+0.4
+0.0
+0.2
carbon source
L-Citrulline (C)
N.D.
N.D.
+0.5
+0.0
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
N.D.
+0.4
-0.0
+0.3
carbon source
Glycolic Acid (C)
N.D.
N.D.
+0.3
+0.1
+0.3
carbon source
L-Alanine (C)
N.D.
N.D.
+1.0
+0.0
-0.1
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