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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS08035 and ABIE40_RS08040 are separated by 72 nucleotides
ABIE40_RS08040 and ABIE40_RS08045 overlap by 4 nucleotides
ABIE40_RS08045 and ABIE40_RS08050 are separated by 17 nucleotides
ABIE40_RS08050 and ABIE40_RS08055 are separated by 117 nucleotides
ABIE40_RS08035: ABIE40_RS08035 - hypothetical protein, at 1,551,013 to 1,551,150
_RS08035
ABIE40_RS08040: ABIE40_RS08040 - DegQ family serine endoprotease, at 1,551,223 to 1,552,626
_RS08040
ABIE40_RS08045: ABIE40_RS08045 - replication-associated recombination protein A, at 1,552,623 to 1,553,939
_RS08045
ABIE40_RS08050: ABIE40_RS08050 - DUF1883 domain-containing protein, at 1,553,957 to 1,554,262
_RS08050
ABIE40_RS08055: ABIE40_RS08055 - hypothetical protein, at 1,554,380 to 1,554,646
_RS08055
Group
Condition
ABIE40
_RS08035
ABIE40
_RS08040
ABIE40
_RS08045
ABIE40
_RS08050
ABIE40
_RS08055
carbon source
Fumarate (C)
N.D.
+0.2
+0.2
-0.2
-3.8
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.4
+0.1
-1.5
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-0.6
+0.1
-0.5
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-0.8
+0.0
-0.4
+0.3
carbon source
L-Citrulline (C)
N.D.
+0.5
-0.1
-0.6
-0.6
stress
R2A with 3-octanone 10.6206 mM
N.D.
-0.2
+0.1
-0.8
+0.2
stress
R2A with 3-octanone 15.9309 mM
N.D.
-0.4
-0.2
-0.5
+0.4
carbon source
D-Glucose (C)
N.D.
+0.3
-0.4
-0.5
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.6
+0.2
-0.3
+0.3
stress
R2A with 3-octanone 15.9309 mM
N.D.
-0.3
-0.0
-0.5
+0.4
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.3
+0.0
-0.5
-0.3
carbon source
Thymidine (C)
N.D.
+0.6
-0.2
+0.1
-0.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-0.5
+0.0
-0.4
+0.8
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
+0.4
+0.0
+0.2
-0.7
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
+0.3
+0.0
-0.9
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.2
+0.0
-0.6
+0.7
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.0
+0.4
-0.6
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
-0.3
-0.2
-0.2
+0.9
carbon source
D-Raffinose (C)
N.D.
+0.7
+0.1
+0.0
-0.6
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.1
-0.4
-0.2
+0.8
carbon source
Itaconic Acid (C)
N.D.
+0.6
-0.1
+0.1
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
+0.4
-0.1
-0.4
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
+0.0
+0.0
-0.5
+1.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.0
+0.3
-0.3
+0.5
carbon source
D-Fructose (C)
N.D.
+0.6
-0.0
+0.4
-0.3
carbon source
L-Tryptophan (C)
N.D.
+0.6
-0.0
-0.3
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
+0.6
-0.2
+0.6
-0.3
carbon source
water (C)
N.D.
+0.3
+0.1
-0.2
+0.5
carbon source
a-Cyclodextrin (C)
N.D.
+0.6
-0.1
+0.3
+0.4
carbon source
a-Cyclodextrin (C)
N.D.
+0.4
-0.0
+0.4
+0.5
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