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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS07985 and ABIE40_RS07990 are separated by 139 nucleotides
ABIE40_RS07990 and ABIE40_RS07995 overlap by 4 nucleotides
ABIE40_RS07995 and ABIE40_RS08000 overlap by 1 nucleotides
ABIE40_RS08000 and ABIE40_RS08005 are separated by 325 nucleotides
ABIE40_RS07985: ABIE40_RS07985 - DUF817 domain-containing protein, at 1,543,013 to 1,543,858
_RS07985
ABIE40_RS07990: ABIE40_RS07990 - DUF2809 domain-containing protein, at 1,543,998 to 1,544,405
_RS07990
ABIE40_RS07995: ABIE40_RS07995 - protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 1,544,402 to 1,545,061
_RS07995
ABIE40_RS08000: ABIE40_RS08000 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 1,545,061 to 1,546,008
_RS08000
ABIE40_RS08005: ABIE40_RS08005 - dihydroxy-acid dehydratase, at 1,546,334 to 1,548,169
_RS08005
Group
Condition
ABIE40
_RS07985
ABIE40
_RS07990
ABIE40
_RS07995
ABIE40
_RS08000
ABIE40
_RS08005
carbon source
Fumarate (C)
+0.3
-1.5
+0.4
+0.3
-3.5
carbon source
Adenosine (C)
+0.3
+0.5
+0.2
+0.2
-4.1
carbon source
L-Aspartic Acid (C)
+0.4
+0.2
+0.1
+0.4
-4.0
carbon source
Gelatin (C)
+0.2
+0.7
+0.1
+0.3
-4.1
carbon source
D-Galactose (C)
+0.2
+0.7
+0.3
+0.3
-4.2
carbon source
L-Citrulline (C)
+0.3
+0.3
+0.4
+0.4
-4.1
carbon source
a-Cyclodextrin (C)
+0.3
+0.5
+0.3
+0.2
-4.0
carbon source
D-Sorbitol (C)
+0.2
+0.7
+0.2
+0.3
-4.0
carbon source
Ethanol (C)
+0.2
+0.9
-0.0
+0.3
-4.0
carbon source
Adenine (C)
+0.2
+0.7
+0.2
+0.3
-3.9
carbon source
Glycolic Acid (C)
+0.2
+0.6
+0.1
+0.4
-3.9
carbon source
Adenine (C)
+0.2
+0.5
+0.4
+0.3
-4.0
carbon source
Carnitine Hydrochloride (C)
+0.3
+0.8
+0.2
+0.3
-4.0
carbon source
D-Trehalose (C)
+0.3
+0.6
+0.4
+0.1
-3.9
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.2
+0.9
+0.1
+0.2
-3.9
carbon source
Ethanol (C)
+0.3
+0.5
+0.4
+0.3
-3.9
carbon source
a-Cyclodextrin (C)
+0.3
+1.0
+0.1
+0.2
-3.9
carbon source
L-Glutamine (C)
+0.1
+1.0
+0.4
+0.2
-4.0
carbon source
4-Hydroxybenzoic Acid (C)
+0.4
+0.5
+0.3
+0.3
-3.8
carbon source
L-Threonine (C)
+0.3
+0.7
+0.2
+0.3
-3.9
carbon source
Carnitine Hydrochloride (C)
+0.2
+0.8
+0.3
+0.4
-4.1
carbon source
D-Serine (C)
+0.2
+0.8
+0.1
+0.5
-3.9
carbon source
L-Leucine (C)
+0.3
+0.8
+0.3
+0.3
-4.0
carbon source
L-Threonine (C)
+0.3
+0.7
+0.3
+0.2
-3.8
carbon source
L-Alanine (C)
+0.2
+0.9
+0.2
+0.4
-3.8
carbon source
water (C)
+0.3
+1.0
+0.2
+0.3
-3.9
carbon source
D-Sorbitol (C)
+0.3
+1.0
+0.2
+0.3
-3.9
carbon source
L-Lysine (C)
+0.3
+1.0
+0.4
+0.2
-3.8
carbon source
D-Ribose (C)
+0.3
+1.2
+0.4
+0.3
-4.1
carbon source
L-Methionine (C)
+0.3
+1.2
+0.7
+0.4
-4.0
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