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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS07800 and ABIE40_RS07805 are separated by 63 nucleotides
ABIE40_RS07805 and ABIE40_RS07810 are separated by 131 nucleotides
ABIE40_RS07810 and ABIE40_RS07815 are separated by 173 nucleotides
ABIE40_RS07815 and ABIE40_RS07820 overlap by 4 nucleotides
ABIE40_RS07800: ABIE40_RS07800 - DNA-directed RNA polymerase subunit beta', at 1,516,798 to 1,521,009
_RS07800
ABIE40_RS07805: ABIE40_RS07805 - hypothetical protein, at 1,521,073 to 1,521,276
_RS07805
ABIE40_RS07810: ABIE40_RS07810 - phosphatase PAP2 family protein, at 1,521,408 to 1,522,118
_RS07810
ABIE40_RS07815: ABIE40_RS07815 - type II toxin-antitoxin system ParD family antitoxin, at 1,522,292 to 1,522,546
_RS07815
ABIE40_RS07820: ABIE40_RS07820 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,522,543 to 1,522,845
_RS07820
Group
Condition
ABIE40
_RS07800
ABIE40
_RS07805
ABIE40
_RS07810
ABIE40
_RS07815
ABIE40
_RS07820
stress
R2A with 3-octanone 15.9309 mM
N.D.
-2.6
-0.4
N.D.
-0.0
carbon source
L-Alanine (C)
N.D.
-3.2
+0.4
N.D.
+0.4
carbon source
casaminos (C)
N.D.
-1.1
-1.1
N.D.
+0.5
carbon source
L-Glutamine (C)
N.D.
-0.9
+0.1
N.D.
+0.4
carbon source
succinate (C)
N.D.
-2.1
+1.0
N.D.
+1.2
carbon source
D-Glucose (C)
N.D.
-0.7
+0.2
N.D.
+0.6
carbon source
Adenine (C)
N.D.
-0.6
+0.2
N.D.
+0.8
stress
R2A with 3-octanone 10.6206 mM
N.D.
+1.1
-0.4
N.D.
-0.0
carbon source
L-Threonine (C)
N.D.
-0.5
+0.8
N.D.
+0.5
carbon source
D-Lactate (C)
N.D.
+0.7
-0.4
N.D.
+0.4
carbon source
Fumarate (C)
N.D.
+1.0
+0.0
N.D.
+0.4
carbon source
Carnitine Hydrochloride (C)
N.D.
+0.3
+0.5
N.D.
+0.7
carbon source
L-Lysine (C)
N.D.
+0.4
+0.6
N.D.
+0.5
carbon source
D-Raffinose (C)
N.D.
+0.8
+0.2
N.D.
+0.5
carbon source
a-Cyclodextrin (C)
N.D.
+0.9
+0.1
N.D.
+0.6
carbon source
Glycolic Acid (C)
N.D.
+0.8
+0.4
N.D.
+0.4
carbon source
D-Glucose-6-Phosphate (C)
N.D.
+0.6
+0.5
N.D.
+0.5
carbon source
pyruvate (C)
N.D.
+0.7
+0.4
N.D.
+0.5
carbon source
Adenosine (C)
N.D.
+0.6
+0.5
N.D.
+0.5
carbon source
L-Methionine (C)
N.D.
+0.6
+0.4
N.D.
+0.6
carbon source
D-Sorbitol (C)
N.D.
+0.4
+0.5
N.D.
+0.6
carbon source
D-Ribose (C)
N.D.
+0.9
+0.1
N.D.
+0.6
carbon source
D-Trehalose (C)
N.D.
+0.6
+0.4
N.D.
+0.6
carbon source
Ethanol (C)
N.D.
+0.8
+0.4
N.D.
+0.5
carbon source
L-Arabinose (C)
N.D.
+1.3
+0.1
N.D.
+0.3
carbon source
L-Tryptophan (C)
N.D.
+1.0
-0.0
N.D.
+0.7
carbon source
L-Aspartic Acid (C)
N.D.
+0.8
+0.6
N.D.
+0.5
carbon source
D-Serine (C)
N.D.
+0.8
+0.4
N.D.
+0.7
carbon source
D-Glucuronic Acid (C)
N.D.
+1.0
+0.7
N.D.
+0.3
carbon source
Thymidine (C)
N.D.
+1.6
+0.3
N.D.
+0.6
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