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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS07040 and ABIE40_RS07045 are separated by 12 nucleotides
ABIE40_RS07045 and ABIE40_RS07050 are separated by 151 nucleotides
ABIE40_RS07050 and ABIE40_RS07055 are separated by 291 nucleotides
ABIE40_RS07055 and ABIE40_RS07060 are separated by 84 nucleotides
ABIE40_RS07040: ABIE40_RS07040 - cupin domain-containing protein, at 1,375,982 to 1,376,326
_RS07040
ABIE40_RS07045: ABIE40_RS07045 - MarR family winged helix-turn-helix transcriptional regulator, at 1,376,339 to 1,376,800
_RS07045
ABIE40_RS07050: ABIE40_RS07050 - SDR family oxidoreductase, at 1,376,952 to 1,377,749
_RS07050
ABIE40_RS07055: ABIE40_RS07055 - phosphate ABC transporter substrate-binding protein PstS, at 1,378,041 to 1,379,063
_RS07055
ABIE40_RS07060: ABIE40_RS07060 - phosphate ABC transporter permease subunit PstC, at 1,379,148 to 1,380,125
_RS07060
Group
Condition
ABIE40
_RS07040
ABIE40
_RS07045
ABIE40
_RS07050
ABIE40
_RS07055
ABIE40
_RS07060
stress
R2A with 3-octanone 10.6206 mM
-0.3
-3.6
-0.2
+0.1
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-3.6
-0.2
+0.3
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.8
-3.5
+0.1
+0.1
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-3.1
-0.6
-0.2
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.2
-2.3
-0.2
+0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.0
-3.5
+0.1
+0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
-3.5
-0.1
+0.1
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-3.6
+0.1
+0.3
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.4
-3.0
-0.2
+0.0
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-2.5
-0.1
+0.0
+0.0
carbon source
Thymidine (C)
-2.1
-1.1
-0.1
+0.2
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
-3.4
+0.1
+0.0
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.4
-2.3
-0.1
+0.2
-0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.1
-2.8
+0.1
+0.3
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.0
-2.5
-0.1
+0.3
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
-2.3
-0.1
+0.2
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
-2.4
-0.0
+0.0
-0.2
carbon source
Glycolic Acid (C)
-0.3
-1.3
-0.2
-0.1
-0.2
dmso control
DMSO control
-0.5
-1.6
-0.2
+0.1
-0.1
carbon source
Fumarate (C)
-1.3
+0.0
-0.5
+0.1
-0.3
carbon source
D-Glucuronic Acid (C)
-0.7
-1.0
-0.1
+0.1
-0.2
stress
R2A with 3-octanone 15.9309 mM
-0.0
-1.7
-0.1
+0.0
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
-2.4
+0.2
+0.1
-0.1
stress
R2A with 3-octanone 15.9309 mM
-0.4
-1.9
+0.2
+0.3
+0.0
carbon source
L-Citrulline (C)
-0.6
-1.1
-0.0
+0.1
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.4
-2.0
-0.2
+0.1
-0.0
dmso control
DMSO control
+0.2
-1.9
-0.1
+0.1
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.0
-1.8
+0.0
+0.2
+0.0
carbon source
Carnitine Hydrochloride (C)
-1.1
-0.7
-0.0
+0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
-1.5
+0.1
+0.3
+0.0
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