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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS06975 and ABIE40_RS06980 are separated by 230 nucleotides
ABIE40_RS06980 and ABIE40_RS06985 are separated by 74 nucleotides
ABIE40_RS06985 and ABIE40_RS06990 are separated by 0 nucleotides
ABIE40_RS06990 and ABIE40_RS06995 are separated by 447 nucleotides
ABIE40_RS06975: ABIE40_RS06975 - 50S ribosomal protein L13, at 1,364,349 to 1,364,813
_RS06975
ABIE40_RS06980: ABIE40_RS06980 - PaaI family thioesterase, at 1,365,044 to 1,365,469
_RS06980
ABIE40_RS06985: ABIE40_RS06985 - enoyl-CoA hydratase, at 1,365,544 to 1,366,377
_RS06985
ABIE40_RS06990: ABIE40_RS06990 - EamA family transporter, at 1,366,378 to 1,367,214
_RS06990
ABIE40_RS06995: ABIE40_RS06995 - hypothetical protein, at 1,367,662 to 1,367,985
_RS06995
Group
Condition
ABIE40
_RS06975
ABIE40
_RS06980
ABIE40
_RS06985
ABIE40
_RS06990
ABIE40
_RS06995
carbon source
Thymidine (C)
N.D.
-0.3
-0.6
-0.1
-0.1
carbon source
L-Tryptophan (C)
N.D.
-0.2
-0.6
-0.2
-0.1
carbon source
Gelatin (C)
N.D.
-0.3
-0.0
-0.1
-0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.3
+0.4
+0.1
-1.1
carbon source
water (C)
N.D.
-0.2
-0.3
-0.1
-0.2
carbon source
L-Aspartic Acid (C)
N.D.
-0.3
-0.2
-0.1
-0.2
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
+0.1
-0.4
-0.1
-0.2
carbon source
D-Lactate (C)
N.D.
-0.4
-0.3
-0.1
+0.2
carbon source
L-Methionine (C)
N.D.
-0.2
-0.4
-0.1
+0.2
carbon source
D-Sorbitol (C)
N.D.
-0.3
-0.3
-0.0
+0.3
carbon source
Fumarate (C)
N.D.
-0.1
-0.3
-0.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
+0.1
-0.0
+0.1
-0.5
stress
R2A with 3-octanone 15.9309 mM
N.D.
+0.2
+0.2
-0.1
-0.5
carbon source
L-Tryptophan (C)
N.D.
-0.5
+0.1
+0.1
+0.2
carbon source
L-Alanine (C)
N.D.
-0.5
-0.1
+0.0
+0.4
carbon source
Gelatin (C)
N.D.
-0.3
+0.0
-0.1
+0.4
carbon source
Glycolic Acid (C)
N.D.
-0.2
-0.1
-0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-0.0
+0.3
+0.1
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
-0.3
+0.4
+0.2
-0.1
carbon source
L-Threonine (C)
N.D.
-0.1
-0.4
+0.0
+0.6
carbon source
Ethanol (C)
N.D.
+0.2
-0.4
-0.0
+0.4
carbon source
Trisodium citrate (C)
N.D.
+0.0
-0.3
+0.1
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
+0.1
+0.3
+0.2
-0.4
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.2
+0.1
+0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-0.1
+0.5
+0.2
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
+0.3
+0.2
+0.3
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.2
+0.3
+0.2
+0.2
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
+0.5
-0.0
+0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
+0.0
+0.5
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.1
+0.4
+0.2
+0.5
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