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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS06285 and ABIE40_RS06290 are separated by 133 nucleotides
ABIE40_RS06290 and ABIE40_RS06295 are separated by 3 nucleotides
ABIE40_RS06295 and ABIE40_RS06300 are separated by 94 nucleotides
ABIE40_RS06300 and ABIE40_RS06305 overlap by 4 nucleotides
ABIE40_RS06285: ABIE40_RS06285 - PDZ domain-containing protein, at 1,231,564 to 1,232,253
_RS06285
ABIE40_RS06290: ABIE40_RS06290 - LysE family translocator, at 1,232,387 to 1,233,022
_RS06290
ABIE40_RS06295: ABIE40_RS06295 - alanine racemase, at 1,233,026 to 1,234,198
_RS06295
ABIE40_RS06300: ABIE40_RS06300 - transcriptional regulator, at 1,234,293 to 1,234,655
_RS06300
ABIE40_RS06305: ABIE40_RS06305 - DUF6516 family protein, at 1,234,652 to 1,234,930
_RS06305
Group
Condition
ABIE40
_RS06285
ABIE40
_RS06290
ABIE40
_RS06295
ABIE40
_RS06300
ABIE40
_RS06305
carbon source
Fumarate (C)
-0.5
-0.1
-0.2
N.D.
+0.3
stress
R2A with 3-octanone 10.6206 mM
+0.4
+0.2
-0.1
N.D.
-0.3
stress
R2A with 3-octanone 10.6206 mM
+0.4
-0.3
+0.0
N.D.
+0.2
carbon source
L-Glutamine (C)
+0.1
+0.3
-0.1
N.D.
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
+0.4
+0.2
N.D.
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.6
-0.0
+0.1
N.D.
+0.1
carbon source
casaminos (C)
+0.7
-0.2
+0.2
N.D.
+0.2
stress
R2A with 3-octanone 10.6206 mM
+0.5
+0.3
+0.1
N.D.
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.5
+0.4
-0.1
N.D.
+0.0
carbon source
a-Cyclodextrin (C)
+0.2
+0.4
+0.0
N.D.
+0.3
carbon source
D-Trehalose (C)
+0.3
+0.3
+0.2
N.D.
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.5
+0.2
+0.1
N.D.
+0.1
carbon source
water (C)
+0.4
+0.3
+0.2
N.D.
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.5
+0.0
N.D.
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.5
+0.2
+0.2
N.D.
+0.1
stress
R2A with 3-octanone 5.3129 mM
+0.7
+0.1
+0.1
N.D.
+0.1
stress
R2A with 3-octanone 5.3129 mM
+0.3
+0.4
+0.1
N.D.
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.3
+0.2
N.D.
+0.1
carbon source
D-Glucuronic Acid (C)
+0.4
+0.4
+0.1
N.D.
+0.1
carbon source
D-Glucose (C)
+0.3
+0.4
+0.1
N.D.
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.6
+0.2
+0.2
N.D.
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.4
+0.3
+0.2
N.D.
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.5
+0.2
+0.2
N.D.
+0.3
carbon source
Thymidine (C)
+0.0
+0.9
+0.4
N.D.
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
+0.3
+0.2
N.D.
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
+0.5
+0.0
N.D.
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
+0.4
+0.3
N.D.
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.6
+0.2
+0.3
N.D.
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.5
+0.5
+0.1
N.D.
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
+0.6
+0.1
N.D.
+0.1
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