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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS05815 and ABIE40_RS05820 are separated by 68 nucleotides
ABIE40_RS05820 and ABIE40_RS05825 overlap by 8 nucleotides
ABIE40_RS05825 and ABIE40_RS05830 overlap by 20 nucleotides
ABIE40_RS05830 and ABIE40_RS05835 are separated by 295 nucleotides
ABIE40_RS05815: ABIE40_RS05815 - hypothetical protein, at 1,145,542 to 1,145,619
_RS05815
ABIE40_RS05820: ABIE40_RS05820 - iron ABC transporter permease, at 1,145,688 to 1,146,617
_RS05820
ABIE40_RS05825: ABIE40_RS05825 - ABC transporter ATP-binding protein, at 1,146,610 to 1,147,419
_RS05825
ABIE40_RS05830: ABIE40_RS05830 - magnesium transporter, at 1,147,400 to 1,148,773
_RS05830
ABIE40_RS05835: ABIE40_RS05835 - zinc-binding alcohol dehydrogenase family protein, at 1,149,069 to 1,150,082
_RS05835
Group
Condition
ABIE40
_RS05815
ABIE40
_RS05820
ABIE40
_RS05825
ABIE40
_RS05830
ABIE40
_RS05835
carbon source
L-Citrulline (C)
N.D.
+0.1
-0.4
-0.3
-0.1
carbon source
pyruvate (C)
N.D.
+0.1
-0.5
-0.1
-0.2
carbon source
Ethanol (C)
N.D.
+0.2
-0.1
-0.1
-0.5
carbon source
D-Ribose (C)
N.D.
+0.1
+0.1
-0.2
-0.4
carbon source
water (C)
N.D.
+0.1
+0.2
-0.4
-0.3
carbon source
L-Asparagine (C)
N.D.
+0.0
-0.3
+0.2
-0.2
carbon source
pyruvate (C)
N.D.
+0.3
+0.0
-0.3
-0.3
carbon source
D-Fructose (C)
N.D.
+0.3
-0.3
-0.2
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
-0.0
-0.4
+0.3
-0.0
carbon source
L-Citrulline (C)
N.D.
+0.3
+0.2
-0.3
-0.4
carbon source
Adenine (C)
N.D.
+0.3
-0.2
+0.1
-0.4
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
-0.3
+0.3
+0.1
carbon source
L-Arabinose (C)
N.D.
+0.3
-0.1
+0.0
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
-0.2
-0.4
+0.4
+0.3
carbon source
L-Threonine (C)
N.D.
+0.4
-0.0
-0.4
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.1
-0.3
+0.1
+0.4
carbon source
Thymidine (C)
N.D.
+0.2
+0.3
-0.3
-0.2
carbon source
L-Alanine (C)
N.D.
+0.5
-0.2
-0.1
-0.0
carbon source
succinate (C)
N.D.
+0.4
+0.1
-0.2
-0.1
carbon source
Glycolic Acid (C)
N.D.
+0.3
+0.2
-0.2
-0.1
carbon source
L-Lysine (C)
N.D.
+0.1
+0.2
+0.2
-0.3
carbon source
a-Cyclodextrin (C)
N.D.
+0.5
-0.0
+0.1
-0.3
carbon source
L-Aspartic Acid (C)
N.D.
+0.3
+0.1
-0.3
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
+0.1
-0.3
+0.3
+0.2
carbon source
Itaconic Acid (C)
N.D.
+0.3
+0.4
-0.2
-0.2
carbon source
D-Serine (C)
N.D.
+0.2
+0.3
-0.1
-0.1
r2a no stress control
R2A no stress control
N.D.
+0.2
-0.2
+0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
+0.3
-0.3
+0.4
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
+0.1
-0.2
+0.4
+0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
+0.3
-0.1
+0.4
+0.2
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