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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS05045 and ABIE40_RS05050 overlap by 8 nucleotides
ABIE40_RS05050 and ABIE40_RS05055 are separated by 41 nucleotides
ABIE40_RS05055 and ABIE40_RS05060 are separated by 287 nucleotides
ABIE40_RS05060 and ABIE40_RS05065 are separated by 60 nucleotides
ABIE40_RS05045: ABIE40_RS05045 - helix-turn-helix domain-containing protein, at 986,188 to 986,628
_RS05045
ABIE40_RS05050: ABIE40_RS05050 - DUF6456 domain-containing protein, at 986,621 to 987,433
_RS05050
ABIE40_RS05055: ABIE40_RS05055 - ornithine cyclodeaminase family protein, at 987,475 to 988,425
_RS05055
ABIE40_RS05060: ABIE40_RS05060 - siderophore-interacting protein, at 988,713 to 989,477
_RS05060
ABIE40_RS05065: ABIE40_RS05065 - LysR family transcriptional regulator, at 989,538 to 990,392
_RS05065
Group
Condition
ABIE40
_RS05045
ABIE40
_RS05050
ABIE40
_RS05055
ABIE40
_RS05060
ABIE40
_RS05065
carbon source
L-Citrulline (C)
-0.8
-0.2
-0.1
+0.3
-0.0
carbon source
4-Hydroxybenzoic Acid (C)
-0.2
-0.2
-0.3
+0.3
-0.3
carbon source
Fumarate (C)
-0.8
-0.1
-0.2
-0.1
+0.4
carbon source
D-Lactate (C)
+0.0
-0.4
+0.1
-0.8
+0.7
carbon source
L-Tryptophan (C)
-0.5
-0.4
+0.1
+0.3
+0.2
carbon source
L-Arabinose (C)
-0.1
-0.5
-0.0
+0.2
+0.3
stress
R2A with 3-octanone 5.3129 mM
+0.4
+0.3
-0.1
-0.4
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.3
-0.1
-0.2
-0.3
+0.4
dmso control
DMSO control
+0.3
-0.2
-0.1
-0.3
+0.5
r2a no stress control
R2A no stress control
+0.2
-0.0
-0.3
-0.1
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.3
+0.1
+0.1
-0.3
+0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.1
+0.1
-0.4
+0.6
carbon source
Ethanol (C)
-0.2
-0.1
+0.4
+0.5
+0.0
stress
R2A with 3-octanone 10.6206 mM
+0.2
-0.3
+0.5
-0.1
+0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
+0.6
+0.1
-0.4
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
+0.2
+0.2
-0.1
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
+0.3
+0.3
-0.7
+0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.5
+0.4
+0.1
-0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.3
+0.4
-0.0
-0.1
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
+0.3
-0.1
+0.1
+0.4
carbon source
L-Lysine (C)
-0.1
-0.3
+0.2
+0.5
+0.7
r2a no stress control
R2A no stress control
+0.3
-0.0
+0.6
-0.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
+0.4
+0.1
-0.1
+0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
+0.4
+0.4
+0.1
+0.4
carbon source
Thymidine (C)
+0.0
+0.5
+0.2
+0.2
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.4
+0.4
-0.3
+0.1
+0.6
stress
R2A with 3-octanone 15.9309 mM
+0.4
+0.3
+0.0
+0.2
+0.5
stress
R2A with 3-octanone 10.6206 mM
+0.6
+0.2
+0.6
+0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
+0.5
+0.4
+0.2
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
+0.4
+0.1
+0.1
+0.8
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