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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS04335 and ABIE40_RS04340 overlap by 4 nucleotides
ABIE40_RS04340 and ABIE40_RS04345 overlap by 4 nucleotides
ABIE40_RS04345 and ABIE40_RS04350 overlap by 4 nucleotides
ABIE40_RS04350 and ABIE40_RS04355 are separated by 3 nucleotides
ABIE40_RS04335: ABIE40_RS04335 - DUF1499 domain-containing protein, at 856,993 to 857,904
_RS04335
ABIE40_RS04340: ABIE40_RS04340 - SDR family oxidoreductase, at 857,901 to 859,586
_RS04340
ABIE40_RS04345: ABIE40_RS04345 - DCC1-like thiol-disulfide oxidoreductase family protein, at 859,583 to 860,041
_RS04345
ABIE40_RS04350: ABIE40_RS04350 - MBL fold metallo-hydrolase, at 860,038 to 860,952
_RS04350
ABIE40_RS04355: ABIE40_RS04355 - cupin domain-containing protein, at 860,956 to 861,252
_RS04355
Group
Condition
ABIE40
_RS04335
ABIE40
_RS04340
ABIE40
_RS04345
ABIE40
_RS04350
ABIE40
_RS04355
carbon source
L-Tryptophan (C)
-0.0
-0.0
-0.3
-2.7
-0.7
carbon source
L-Tryptophan (C)
-0.1
+0.2
+0.2
-2.5
-0.9
carbon source
L-Alanine (C)
+0.1
-0.0
-1.0
-0.9
-0.2
carbon source
L-Alanine (C)
-0.0
-0.2
+0.2
-1.1
-0.3
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.2
+0.2
+0.0
-1.0
-0.4
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.0
+0.0
-1.2
-0.2
carbon source
casaminos (C)
-0.1
+0.0
-0.2
-0.5
-0.5
carbon source
pyruvate (C)
-0.0
+0.0
-0.1
-0.9
-0.2
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.0
-0.0
-0.3
-0.7
-0.0
carbon source
pyruvate (C)
-0.3
+0.1
+0.0
-0.6
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
-0.0
+0.2
+0.1
-0.9
-0.3
carbon source
a-Cyclodextrin (C)
-0.1
+0.1
-0.4
-0.2
-0.4
stress
R2A with 3-octanone 5.3129 mM
-0.1
-0.2
-0.9
+0.2
+0.2
carbon source
L-Aspartic Acid (C)
-0.0
-0.0
-0.6
+0.2
-0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
-0.1
-0.1
-0.2
-0.5
carbon source
Thymidine (C)
+0.2
-0.4
-0.2
-0.0
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.2
-0.5
-0.3
-0.0
carbon source
D-Serine (C)
+0.0
-0.1
+0.2
-0.5
-0.2
stress
R2A with 3-octanone 5.3129 mM
-0.3
+0.2
-0.0
+0.1
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
-0.0
-0.3
-0.1
-0.4
carbon source
Fumarate (C)
-0.3
+0.5
-0.6
+0.1
-0.0
carbon source
L-Citrulline (C)
+0.2
-0.1
+0.3
-0.2
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
+0.3
-0.5
-0.0
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.0
+0.2
-0.6
+0.1
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.2
-0.5
+0.1
-0.3
carbon source
D-Galactose (C)
-0.1
-0.2
-0.3
+0.3
+0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.0
-0.5
+0.2
+0.3
stress
R2A with 3-octanone 15.9309 mM
+0.0
+0.2
-0.5
+0.3
+0.3
stress
R2A with 3-octanone 10.6206 mM
+0.3
+0.3
-0.4
+0.1
+0.4
carbon source
D-Glucuronic Acid (C)
-0.2
-0.1
+0.2
+0.6
+0.5
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