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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS03440 and ABIE40_RS03445 are separated by 57 nucleotides
ABIE40_RS03445 and ABIE40_RS03450 are separated by 1 nucleotides
ABIE40_RS03450 and ABIE40_RS03455 are separated by 236 nucleotides
ABIE40_RS03455 and ABIE40_RS03460 are separated by 39 nucleotides
ABIE40_RS03440: ABIE40_RS03440 - RlmE family RNA methyltransferase, at 683,807 to 684,526
_RS03440
ABIE40_RS03445: ABIE40_RS03445 - VOC family protein, at 684,584 to 684,967
_RS03445
ABIE40_RS03450: ABIE40_RS03450 - DHA2 family efflux MFS transporter permease subunit, at 684,969 to 686,393
_RS03450
ABIE40_RS03455: ABIE40_RS03455 - MBL fold metallo-hydrolase, at 686,630 to 687,619
_RS03455
ABIE40_RS03460: ABIE40_RS03460 - SAM-dependent methyltransferase, at 687,659 to 688,270
_RS03460
Group
Condition
ABIE40
_RS03440
ABIE40
_RS03445
ABIE40
_RS03450
ABIE40
_RS03455
ABIE40
_RS03460
carbon source
D-Lactate (C)
N.D.
-0.2
-0.1
-0.3
-1.1
carbon source
Ethanol (C)
N.D.
-0.4
-0.1
-0.1
-1.0
dmso control
DMSO control
N.D.
-0.4
-0.2
-0.2
-0.7
carbon source
Adenine (C)
N.D.
+0.2
-0.2
-0.1
-1.0
carbon source
Itaconic Acid (C)
N.D.
+0.1
+0.0
-0.1
-0.8
carbon source
L-Arabinose (C)
N.D.
+0.1
-0.2
-0.2
-0.5
carbon source
Formate (C)
N.D.
+0.2
-0.2
-0.2
-0.4
carbon source
Thymidine (C)
N.D.
-0.2
-0.6
-0.1
+0.4
carbon source
a-Cyclodextrin (C)
N.D.
+0.2
+0.2
-0.1
-0.8
carbon source
D-Glucuronic Acid (C)
N.D.
+0.1
+0.2
-0.2
-0.5
carbon source
L-Glutamine (C)
N.D.
+0.2
+0.2
-0.1
-0.6
carbon source
Carnitine Hydrochloride (C)
N.D.
+0.4
-0.0
-0.1
-0.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
+0.1
-0.3
-0.3
+0.3
carbon source
Fumarate (C)
N.D.
-0.2
+0.3
+0.3
-0.5
carbon source
L-Arabinose (C)
N.D.
+0.3
+0.3
+0.0
-0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
+0.2
-0.3
-0.2
+0.5
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.3
-0.2
-0.3
+0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.1
+0.3
-0.5
+0.7
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.2
-0.2
-0.1
+0.5
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.4
-0.1
-0.2
+0.3
r2a no stress control
R2A no stress control
N.D.
+0.3
-0.1
-0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
+0.2
-0.2
+0.1
+0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
+0.3
-0.0
-0.1
+0.5
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.0
-0.1
+0.3
+0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
+0.2
-0.1
-0.1
+0.6
carbon source
casaminos (C)
N.D.
-0.1
+0.3
-0.2
+0.7
stress
R2A with 3-octanone 15.9309 mM
N.D.
+0.5
-0.3
+0.2
+0.5
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.1
+0.4
-0.1
+0.5
dmso control
DMSO control
N.D.
+0.3
+0.2
+0.1
+0.6
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.3
+0.2
-0.0
+0.9
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