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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS03380 and ABIE40_RS03385 are separated by 88 nucleotides
ABIE40_RS03385 and ABIE40_RS03390 overlap by 4 nucleotides
ABIE40_RS03390 and ABIE40_RS03395 are separated by 167 nucleotides
ABIE40_RS03395 and ABIE40_RS03400 are separated by 43 nucleotides
ABIE40_RS03380: ABIE40_RS03380 - FAD-binding oxidoreductase, at 673,701 to 674,948
_RS03380
ABIE40_RS03385: ABIE40_RS03385 - isoprenylcysteine carboxylmethyltransferase family protein, at 675,037 to 675,528
_RS03385
ABIE40_RS03390: ABIE40_RS03390 - type III polyketide synthase, at 675,525 to 676,577
_RS03390
ABIE40_RS03395: ABIE40_RS03395 - tetratricopeptide repeat protein, at 676,745 to 677,281
_RS03395
ABIE40_RS03400: ABIE40_RS03400 - RNA polymerase sigma factor, at 677,325 to 677,930
_RS03400
Group
Condition
ABIE40
_RS03380
ABIE40
_RS03385
ABIE40
_RS03390
ABIE40
_RS03395
ABIE40
_RS03400
carbon source
L-Citrulline (C)
-0.2
-0.3
-0.5
-0.2
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
-0.4
-0.2
+0.2
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
+0.0
-0.3
+0.3
-0.3
stress
R2A with 3-octanone 5.3129 mM
-0.0
-0.6
-0.1
+0.2
+0.2
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.1
-0.0
+0.5
+0.0
-0.5
carbon source
D-Lactate (C)
+0.1
-0.4
+0.6
-0.2
-0.2
carbon source
D-Sorbitol (C)
+0.2
+0.0
+0.3
-0.1
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
-0.9
+0.3
+0.2
+0.2
carbon source
L-Alanine (C)
-0.2
+0.6
-0.2
-0.4
+0.3
stress
R2A with 3-octanone 10.6206 mM
+0.2
-0.4
+0.4
+0.2
-0.2
stress
R2A with 3-octanone 15.9309 mM
+0.4
-0.2
+0.3
+0.2
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
-0.3
-0.5
+0.3
+0.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
-0.4
+0.1
+0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
-0.5
+0.3
+0.3
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
-0.3
+0.2
+0.2
+0.2
carbon source
L-Tryptophan (C)
-0.1
+0.2
+0.3
-0.3
+0.4
stress
R2A with 3-octanone 10.6206 mM
+0.3
-0.5
+0.4
+0.2
+0.1
carbon source
L-Aspartic Acid (C)
+0.1
-0.2
+0.4
+0.2
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
-0.2
+0.1
+0.2
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
-0.4
+0.2
+0.2
+0.6
r2a no stress control
R2A no stress control
+0.2
-0.3
+0.3
+0.4
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.0
-0.2
+0.4
+0.2
+0.5
carbon source
Adenine (C)
+0.3
+0.1
+0.5
+0.2
-0.3
carbon source
D-Fructose (C)
+0.1
+0.4
+0.4
-0.5
+0.5
carbon source
Formate (C)
+0.2
-0.2
+0.2
+0.2
+0.4
stress
R2A with 3-octanone 15.9309 mM
+0.3
-0.4
+0.4
+0.2
+0.4
stress
R2A with 3-octanone 5.3129 mM
+0.4
-0.0
-0.2
+0.2
+0.5
carbon source
L-Citrulline (C)
-0.1
+0.4
+0.3
-0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-0.2
+0.1
+0.5
+0.7
carbon source
Fumarate (C)
+0.5
+0.3
+0.6
-0.2
+0.1
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