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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS03020 and ABIE40_RS03025 are separated by 392 nucleotides
ABIE40_RS03025 and ABIE40_RS03030 are separated by 270 nucleotides
ABIE40_RS03030 and ABIE40_RS03035 are separated by 245 nucleotides
ABIE40_RS03035 and ABIE40_RS03040 are separated by 300 nucleotides
ABIE40_RS03020: ABIE40_RS03020 - glycosyl transferase, at 593,538 to 595,454
_RS03020
ABIE40_RS03025: ABIE40_RS03025 - flagellin, at 595,847 to 596,743
_RS03025
ABIE40_RS03030: ABIE40_RS03030 - flagellin, at 597,014 to 597,913
_RS03030
ABIE40_RS03035: ABIE40_RS03035 - flagellin, at 598,159 to 599,064
_RS03035
ABIE40_RS03040: ABIE40_RS03040 - flagellin, at 599,365 to 600,312
_RS03040
Group
Condition
ABIE40
_RS03020
ABIE40
_RS03025
ABIE40
_RS03030
ABIE40
_RS03035
ABIE40
_RS03040
carbon source
L-Alanine (C)
+0.2
-1.9
+0.2
-0.1
-1.0
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-1.3
+0.1
-0.1
-1.0
carbon source
D-Lactate (C)
+0.2
-1.1
+0.0
-0.1
-0.7
carbon source
L-Threonine (C)
+0.1
-1.2
-0.2
+0.1
-0.4
carbon source
Glycolic Acid (C)
+0.2
-1.1
+0.2
-0.0
-0.7
carbon source
Trisodium citrate (C)
+0.3
-0.6
-0.3
+0.1
-0.8
carbon source
L-Alanine (C)
+0.1
-0.9
+0.2
+0.1
-0.7
carbon source
Gelatin (C)
+0.1
-1.2
+0.1
+0.2
-0.3
carbon source
L-Lysine (C)
+0.1
-0.8
+0.1
+0.0
-0.5
carbon source
Ethanol (C)
-0.0
-0.9
+0.4
+0.0
-0.5
carbon source
L-Aspartic Acid (C)
+0.1
-0.5
+0.1
+0.2
-0.8
carbon source
L-Citrulline (C)
-0.2
-0.7
-0.0
+0.4
-0.4
carbon source
Formate (C)
+0.1
-0.5
-0.1
+0.2
-0.6
carbon source
L-Glutamine (C)
+0.2
-0.8
+0.2
+0.2
-0.6
carbon source
D-Sorbitol (C)
+0.2
-0.5
+0.2
+0.2
-0.7
carbon source
D-Ribose (C)
+0.2
-0.7
+0.0
+0.4
-0.4
carbon source
a-Cyclodextrin (C)
+0.1
-0.5
-0.1
+0.4
-0.5
carbon source
L-Methionine (C)
+0.0
-0.8
+0.4
+0.3
-0.3
carbon source
L-Methionine (C)
+0.2
-0.4
+0.4
+0.4
-0.8
carbon source
casaminos (C)
+0.2
-0.4
+0.4
+0.3
-0.3
carbon source
Carnitine Hydrochloride (C)
+0.1
-0.3
+0.4
+0.4
-0.4
carbon source
a-Cyclodextrin (C)
+0.2
-0.6
+0.5
+0.3
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
+0.5
+0.7
+0.2
-0.2
stress
R2A with 3-octanone 15.9309 mM
+0.2
+0.6
+0.7
+0.0
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.8
+0.4
+0.1
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
+0.8
+0.3
+0.6
+0.0
stress
R2A with 3-octanone 5.3129 mM
+0.0
+0.4
+0.6
+0.1
+0.5
stress
R2A with 3-octanone 10.6206 mM
+0.2
+0.7
+0.4
+0.1
+0.3
stress
R2A with 3-octanone 10.6206 mM
+0.0
+1.1
+0.7
+0.2
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.2
+0.7
+0.8
+0.2
+0.3
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