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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS02900 and ABIE40_RS02905 are separated by 16 nucleotides
ABIE40_RS02905 and ABIE40_RS02910 are separated by 109 nucleotides
ABIE40_RS02910 and ABIE40_RS02915 are separated by 585 nucleotides
ABIE40_RS02915 and ABIE40_RS02920 are separated by 10 nucleotides
ABIE40_RS02900: ABIE40_RS02900 - chemoreceptor glutamine deamidase CheD, at 574,137 to 574,691
_RS02900
ABIE40_RS02905: ABIE40_RS02905 - hypothetical protein, at 574,708 to 575,097
_RS02905
ABIE40_RS02910: ABIE40_RS02910 - flagellar basal-body MS-ring/collar protein FliF, at 575,207 to 576,907
_RS02910
ABIE40_RS02915: ABIE40_RS02915 - helix-turn-helix transcriptional regulator, at 577,493 to 578,239
_RS02915
ABIE40_RS02920: ABIE40_RS02920 - helix-turn-helix transcriptional regulator, at 578,250 to 578,990
_RS02920
Group
Condition
ABIE40
_RS02900
ABIE40
_RS02905
ABIE40
_RS02910
ABIE40
_RS02915
ABIE40
_RS02920
stress
R2A with 3-octanone 15.9309 mM
N.D.
+0.2
-0.6
-2.0
-2.2
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.2
-0.3
-2.1
-1.9
carbon source
Fumarate (C)
N.D.
-2.9
-0.1
-0.7
-0.1
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.2
-0.1
-1.6
-2.0
carbon source
D-Lactate (C)
N.D.
-2.3
-0.0
-0.7
-0.3
stress
R2A with 3-octanone 15.9309 mM
N.D.
+0.5
-0.2
-1.7
-2.0
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
-0.2
-1.5
-1.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-1.1
+0.3
-0.8
-1.0
carbon source
D-Glucose-6-Phosphate (C)
N.D.
-0.4
-0.3
-1.1
-0.9
dmso control
DMSO control
N.D.
-0.7
-0.4
-0.7
-0.7
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-1.0
+0.3
-1.1
-0.6
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.5
-0.0
-1.6
-1.2
dmso control
DMSO control
N.D.
-0.5
-0.3
-0.6
-0.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
-2.0
+0.1
-0.3
-0.1
r2a no stress control
R2A no stress control
N.D.
-0.7
-0.5
-0.6
-0.4
r2a no stress control
R2A no stress control
N.D.
-0.5
-0.3
-0.5
-0.9
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.6
+0.0
-0.9
-0.6
carbon source
L-Arabinose (C)
N.D.
+0.2
-0.2
-1.2
-0.9
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
+0.1
-1.3
-0.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
-1.0
+0.1
-0.8
-0.1
stress
R2A with 3-octanone 10.6206 mM
N.D.
+0.6
-0.3
-1.0
-1.1
carbon source
L-Arabinose (C)
N.D.
+0.4
-0.0
-0.7
-1.4
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.8
+0.3
-0.7
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.6
+0.3
-1.2
-0.1
carbon source
L-Lysine (C)
N.D.
+0.8
-0.0
-1.0
-0.8
carbon source
D-Sorbitol (C)
N.D.
+0.6
+0.2
-0.6
-0.8
carbon source
L-Tryptophan (C)
N.D.
-1.4
+0.3
+0.3
+0.5
carbon source
L-Alanine (C)
N.D.
+0.6
-1.0
+0.4
-0.2
carbon source
a-Cyclodextrin (C)
N.D.
+1.3
-0.3
-0.3
-0.3
carbon source
L-Asparagine (C)
N.D.
+0.8
+1.1
+1.0
+1.0
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