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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS02795 and ABIE40_RS02800 overlap by 4 nucleotides
ABIE40_RS02800 and ABIE40_RS02805 are separated by 2 nucleotides
ABIE40_RS02805 and ABIE40_RS02810 overlap by 14 nucleotides
ABIE40_RS02810 and ABIE40_RS02815 are separated by 187 nucleotides
ABIE40_RS02795: ABIE40_RS02795 - VOC family protein, at 550,559 to 552,184
_RS02795
ABIE40_RS02800: ABIE40_RS02800 - response regulator, at 552,181 to 553,803
_RS02800
ABIE40_RS02805: ABIE40_RS02805 - response regulator, at 553,806 to 554,231
_RS02805
ABIE40_RS02810: ABIE40_RS02810 - PAS domain S-box protein, at 554,218 to 556,365
_RS02810
ABIE40_RS02815: ABIE40_RS02815 - response regulator, at 556,553 to 556,921
_RS02815
Group
Condition
ABIE40
_RS02795
ABIE40
_RS02800
ABIE40
_RS02805
ABIE40
_RS02810
ABIE40
_RS02815
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
-0.1
-0.1
-0.2
-0.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
-0.5
-0.4
+0.0
-0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
-0.0
-0.4
+0.0
-0.7
stress
R2A with 3-octanone 10.6206 mM
+0.0
-0.3
-0.1
+0.2
-1.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
-0.2
-0.2
-0.2
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.3
-0.2
-0.0
-0.1
-1.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
-0.2
-0.3
-0.1
-0.4
carbon source
Thymidine (C)
+0.1
-0.0
-0.1
+0.1
-0.9
stress
R2A with 3-octanone 10.6206 mM
+0.1
-0.1
+0.0
+0.0
-0.7
r2a no stress control
R2A no stress control
+0.2
-0.3
+0.0
-0.1
-0.4
r2a no stress control
R2A no stress control
+0.1
+0.1
-0.3
-0.1
-0.5
stress
R2A with 3-octanone 15.9309 mM
+0.1
-0.2
+0.2
-0.1
-0.4
carbon source
Fumarate (C)
+0.3
+0.3
-0.5
+0.1
-0.6
carbon source
casaminos (C)
-0.2
-0.2
+0.3
+0.3
-0.2
carbon source
D-Lactate (C)
+0.2
-0.3
+0.1
+0.4
-0.3
carbon source
L-Alanine (C)
-0.3
-0.0
+0.2
+0.4
+0.3
carbon source
L-Lysine (C)
-0.3
-0.1
+0.1
+0.4
+0.3
carbon source
D-Raffinose (C)
+0.2
-0.2
-0.1
+0.3
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.1
-0.4
+0.5
+0.6
carbon source
D-Fructose (C)
+0.0
+0.0
-0.1
+0.6
+0.3
carbon source
4-Hydroxybenzoic Acid (C)
+0.0
-0.0
-0.1
+0.4
+0.5
carbon source
D-Fructose (C)
+0.2
-0.2
-0.2
+0.5
+0.5
carbon source
L-Lysine (C)
-0.1
+0.0
+0.1
+0.5
+0.3
carbon source
D-Trehalose (C)
+0.0
-0.2
-0.0
+0.5
+0.6
carbon source
L-Aspartic Acid (C)
-0.2
-0.1
-0.3
+0.8
+0.6
carbon source
L-Aspartic Acid (C)
+0.1
+0.1
-0.3
+0.7
+0.4
carbon source
D-Serine (C)
-0.0
+0.0
-0.1
+0.6
+0.7
carbon source
L-Alanine (C)
+0.1
+0.3
-0.1
+0.4
+0.3
carbon source
L-Arabinose (C)
-0.4
-0.0
-0.0
+1.2
+1.1
carbon source
L-Arabinose (C)
-0.7
+0.2
+0.3
+1.2
+1.0
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