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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS02230 and ABIE40_RS02235 are separated by 33 nucleotides
ABIE40_RS02235 and ABIE40_RS02240 are separated by 228 nucleotides
ABIE40_RS02240 and ABIE40_RS02245 are separated by 3 nucleotides
ABIE40_RS02245 and ABIE40_RS02250 are separated by 195 nucleotides
ABIE40_RS02230: ABIE40_RS02230 - aldo/keto reductase, at 440,113 to 441,132
_RS02230
ABIE40_RS02235: ABIE40_RS02235 - altronate dehydratase family protein, at 441,166 to 442,668
_RS02235
ABIE40_RS02240: ABIE40_RS02240 - GntR family transcriptional regulator, at 442,897 to 443,793
_RS02240
ABIE40_RS02245: ABIE40_RS02245 - MDR family MFS transporter, at 443,797 to 445,287
_RS02245
ABIE40_RS02250: ABIE40_RS02250 - hypothetical protein, at 445,483 to 446,328
_RS02250
Group
Condition
ABIE40
_RS02230
ABIE40
_RS02235
ABIE40
_RS02240
ABIE40
_RS02245
ABIE40
_RS02250
carbon source
D-Glucose-6-Phosphate (C)
+0.5
-5.6
-0.8
-0.1
+0.0
carbon source
D-Raffinose (C)
-1.1
-4.3
-0.0
+0.0
-0.1
carbon source
D-Glucose-6-Phosphate (C)
+0.5
-5.0
-1.0
+0.0
+0.0
carbon source
D-Raffinose (C)
-1.1
-3.9
-0.3
+0.3
+0.0
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
-0.1
-1.7
-0.1
-0.3
carbon source
Formate (C)
-0.6
-1.9
+0.3
+0.0
-0.1
carbon source
Formate (C)
-0.8
-2.0
+0.4
+0.2
+0.1
carbon source
D-Sorbitol (C)
-0.1
-0.1
-1.5
-0.1
+0.0
carbon source
D-Glucuronic Acid (C)
-0.2
-0.1
-1.4
-0.0
-0.0
carbon source
D-Serine (C)
+0.0
+0.1
-1.6
-0.1
+0.0
carbon source
D-Serine (C)
+0.0
+0.0
-1.7
+0.1
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.0
-1.2
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.4
+0.1
-0.7
-0.0
-0.3
stress
R2A with 3-octanone 10.6206 mM
-0.5
-0.1
-0.5
-0.1
-0.1
carbon source
D-Glucuronic Acid (C)
-0.2
+0.1
-1.3
+0.1
-0.0
carbon source
L-Tryptophan (C)
-0.0
-0.1
-1.1
-0.2
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
+0.0
-1.1
+0.2
+0.1
carbon source
Thymidine (C)
+0.1
-0.1
-0.4
-0.4
-0.5
carbon source
D-Sorbitol (C)
-0.1
+0.1
-1.2
+0.1
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.4
+0.0
-0.7
+0.1
-0.1
carbon source
L-Citrulline (C)
-0.0
-0.1
-0.9
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
+0.1
-0.9
+0.1
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
+0.3
-0.9
+0.1
-0.1
carbon source
L-Tryptophan (C)
+0.2
+0.1
-0.7
-0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
+0.1
-0.6
+0.2
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
+0.2
-0.6
+0.3
-0.1
carbon source
L-Aspartic Acid (C)
-0.1
-0.0
+1.7
-0.0
-0.1
carbon source
Gelatin (C)
-0.1
+0.1
+2.0
+0.0
-0.0
carbon source
Gelatin (C)
-0.1
+0.0
+2.0
-0.1
-0.0
carbon source
L-Aspartic Acid (C)
-0.1
+0.2
+2.0
-0.0
-0.0
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