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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS02170 and ABIE40_RS02175 are separated by 46 nucleotides
ABIE40_RS02175 and ABIE40_RS02180 overlap by 4 nucleotides
ABIE40_RS02180 and ABIE40_RS02185 overlap by 4 nucleotides
ABIE40_RS02185 and ABIE40_RS02190 are separated by 58 nucleotides
ABIE40_RS02170: ABIE40_RS02170 - VOC family protein, at 428,044 to 428,439
_RS02170
ABIE40_RS02175: ABIE40_RS02175 - ABC transporter permease, at 428,486 to 429,235
_RS02175
ABIE40_RS02180: ABIE40_RS02180 - ABC transporter ATP-binding protein, at 429,232 to 430,176
_RS02180
ABIE40_RS02185: ABIE40_RS02185 - ABC transporter permease, at 430,173 to 431,339
_RS02185
ABIE40_RS02190: ABIE40_RS02190 - ABC transporter substrate-binding protein, at 431,398 to 432,306
_RS02190
Group
Condition
ABIE40
_RS02170
ABIE40
_RS02175
ABIE40
_RS02180
ABIE40
_RS02185
ABIE40
_RS02190
carbon source
D-Fructose (C)
-0.4
-0.0
-0.2
-0.6
-0.1
stress
R2A with 3-octanone 10.6206 mM
-0.5
-0.4
-0.2
-0.0
-0.1
dmso control
DMSO control
-0.9
+0.0
-0.2
+0.0
+0.0
carbon source
casaminos (C)
-0.3
+0.2
-0.5
-0.2
+0.0
carbon source
pyruvate (C)
-0.1
+0.3
-0.4
-0.4
-0.1
carbon source
L-Citrulline (C)
-0.2
+0.2
-0.2
-0.6
+0.0
carbon source
Itaconic Acid (C)
-0.3
+0.4
-0.2
-0.4
-0.2
carbon source
D-Glucuronic Acid (C)
+0.1
+0.1
-0.6
-0.3
+0.1
carbon source
succinate (C)
+0.1
+0.2
-0.2
-0.5
-0.1
carbon source
L-Citrulline (C)
-0.5
-0.0
-0.3
+0.5
-0.1
carbon source
D-Galactose (C)
+0.1
+0.3
-0.4
-0.4
-0.0
stress
R2A with 3-octanone 5.3129 mM
-0.7
-0.2
+0.2
+0.3
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
-0.2
-0.4
+0.7
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.6
-0.1
-0.0
+0.5
-0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
+0.2
-0.4
+0.4
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.7
+0.0
+0.1
+0.3
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.6
+0.3
-0.2
+0.4
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.5
-0.0
+0.2
+0.5
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.7
+0.2
-0.2
+0.8
+0.0
stress
R2A with 3-octanone 5.3129 mM
-0.5
-0.3
+0.2
+0.6
+0.2
carbon source
L-Glutamine (C)
-0.1
+0.4
-0.3
+0.2
+0.1
stress
R2A with 3-octanone 15.9309 mM
-0.1
+0.4
-0.4
+0.5
+0.0
carbon source
Thymidine (C)
+0.4
-0.2
+0.3
-0.3
+0.3
r2a no stress control
R2A no stress control
-0.4
+0.1
+0.3
+0.4
+0.0
stress
R2A with 3-octanone 10.6206 mM
-0.5
-0.0
+0.4
+0.7
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
+0.2
+0.4
+0.2
+0.2
carbon source
L-Tryptophan (C)
+0.3
+0.5
+0.1
-0.2
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
-0.2
+0.0
+1.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.2
+0.3
+0.3
+0.8
+0.2
carbon source
L-Tryptophan (C)
-0.1
+0.6
+0.4
+0.1
+0.4
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