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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS01825 and ABIE40_RS01830 overlap by 9 nucleotides
ABIE40_RS01830 and ABIE40_RS01835 are separated by 112 nucleotides
ABIE40_RS01835 and ABIE40_RS01840 are separated by 29 nucleotides
ABIE40_RS01840 and ABIE40_RS01845 are separated by 217 nucleotides
ABIE40_RS01825: ABIE40_RS01825 - GNAT family N-acetyltransferase, at 361,761 to 362,207
_RS01825
ABIE40_RS01830: ABIE40_RS01830 - LapA family protein, at 362,199 to 362,531
_RS01830
ABIE40_RS01835: ABIE40_RS01835 - integration host factor subunit beta, at 362,644 to 362,943
_RS01835
ABIE40_RS01840: ABIE40_RS01840 - signal peptide peptidase SppA, at 362,973 to 363,923
_RS01840
ABIE40_RS01845: ABIE40_RS01845 - LPS export ABC transporter periplasmic protein LptC, at 364,141 to 364,806
_RS01845
Group
Condition
ABIE40
_RS01825
ABIE40
_RS01830
ABIE40
_RS01835
ABIE40
_RS01840
ABIE40
_RS01845
carbon source
D-Lactate (C)
-0.0
N.D.
N.D.
-0.5
N.D.
carbon source
Thymidine (C)
-0.1
N.D.
N.D.
-0.4
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.3
N.D.
N.D.
-0.1
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.0
N.D.
N.D.
-0.4
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
N.D.
N.D.
-0.2
N.D.
carbon source
Carnitine Hydrochloride (C)
-0.2
N.D.
N.D.
-0.1
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
N.D.
N.D.
-0.0
N.D.
stress
R2A with 3-octanone 15.9309 mM
-0.0
N.D.
N.D.
-0.2
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
N.D.
N.D.
-0.1
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
N.D.
N.D.
-0.2
N.D.
r2a no stress control
R2A no stress control
-0.2
N.D.
N.D.
-0.0
N.D.
carbon source
succinate (C)
-0.1
N.D.
N.D.
-0.1
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
N.D.
N.D.
-0.1
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
N.D.
N.D.
-0.3
N.D.
carbon source
D-Fructose (C)
-0.3
N.D.
N.D.
+0.1
N.D.
carbon source
casaminos (C)
+0.1
N.D.
N.D.
-0.2
N.D.
carbon source
L-Citrulline (C)
+0.2
N.D.
N.D.
-0.3
N.D.
carbon source
Formate (C)
+0.1
N.D.
N.D.
-0.2
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.1
N.D.
N.D.
-0.2
N.D.
carbon source
Glycolic Acid (C)
-0.2
N.D.
N.D.
+0.1
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
N.D.
N.D.
+0.1
N.D.
carbon source
Adenine (C)
+0.1
N.D.
N.D.
-0.1
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.1
N.D.
N.D.
-0.1
N.D.
carbon source
D-Glucuronic Acid (C)
-0.0
N.D.
N.D.
+0.2
N.D.
carbon source
Itaconic Acid (C)
+0.1
N.D.
N.D.
+0.1
N.D.
carbon source
L-Lysine (C)
+0.2
N.D.
N.D.
+0.1
N.D.
carbon source
L-Threonine (C)
+0.1
N.D.
N.D.
+0.1
N.D.
carbon source
D-Glucose-6-Phosphate (C)
+0.1
N.D.
N.D.
+0.2
N.D.
carbon source
L-Asparagine (C)
+0.3
N.D.
N.D.
-0.0
N.D.
carbon source
Adenine (C)
+0.2
N.D.
N.D.
+0.2
N.D.
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