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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS01490 and ABIE40_RS01495 overlap by 14 nucleotides
ABIE40_RS01495 and ABIE40_RS01500 are separated by 73 nucleotides
ABIE40_RS01500 and ABIE40_RS01505 are separated by 94 nucleotides
ABIE40_RS01505 and ABIE40_RS01510 are separated by 118 nucleotides
ABIE40_RS01490: ABIE40_RS01490 - class II glutamine amidotransferase, at 293,117 to 293,926
_RS01490
ABIE40_RS01495: ABIE40_RS01495 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 293,913 to 295,124
_RS01495
ABIE40_RS01500: ABIE40_RS01500 - DMT family transporter, at 295,198 to 296,121
_RS01500
ABIE40_RS01505: ABIE40_RS01505 - LysR family transcriptional regulator, at 296,216 to 297,115
_RS01505
ABIE40_RS01510: ABIE40_RS01510 - NmrA family NAD(P)-binding protein, at 297,234 to 298,094
_RS01510
Group
Condition
ABIE40
_RS01490
ABIE40
_RS01495
ABIE40
_RS01500
ABIE40
_RS01505
ABIE40
_RS01510
carbon source
L-Citrulline (C)
-0.2
N.D.
-0.1
-0.5
-2.5
carbon source
D-Galactose (C)
-0.1
N.D.
+0.1
-0.2
-1.9
carbon source
D-Raffinose (C)
-0.0
N.D.
-0.1
-0.3
-1.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
N.D.
-0.1
-0.5
-1.5
carbon source
D-Fructose (C)
-0.5
N.D.
-0.4
+0.1
-0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
N.D.
-0.0
-0.2
-1.3
carbon source
Fumarate (C)
+0.3
N.D.
-0.7
-0.2
-0.8
carbon source
Itaconic Acid (C)
-0.4
N.D.
-0.1
+0.1
-0.9
carbon source
L-Tryptophan (C)
-0.1
N.D.
-0.1
+0.0
-1.2
carbon source
D-Serine (C)
-0.0
N.D.
-0.2
-0.4
-0.7
carbon source
casaminos (C)
+0.1
N.D.
+0.1
+0.0
-1.5
r2a no stress control
R2A no stress control
+0.0
N.D.
-0.0
-0.3
-0.9
carbon source
Ethanol (C)
-0.1
N.D.
-0.6
-0.1
-0.4
carbon source
L-Arabinose (C)
-0.0
N.D.
+0.1
+0.1
-1.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
N.D.
+0.2
-0.1
-0.9
dmso control
DMSO control
+0.0
N.D.
-0.0
-0.1
-1.0
carbon source
L-Methionine (C)
-0.3
N.D.
-0.3
-0.0
-0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
N.D.
-0.3
+0.1
-0.9
carbon source
L-Glutamine (C)
-0.1
N.D.
-0.1
-0.3
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.3
N.D.
+0.1
-0.3
-1.2
carbon source
Formate (C)
-0.1
N.D.
+0.1
-0.0
-0.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
N.D.
+0.2
-0.3
-0.9
carbon source
D-Glucose (C)
+0.2
N.D.
-0.0
-0.3
-0.6
carbon source
D-Sorbitol (C)
+0.2
N.D.
-0.1
-0.1
-0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.5
N.D.
+0.0
-0.3
-0.8
stress
R2A with 3-octanone 10.6206 mM
-0.2
N.D.
-0.3
-0.4
+0.4
carbon source
L-Lysine (C)
+0.3
N.D.
-0.7
-0.1
+0.0
carbon source
a-Cyclodextrin (C)
+0.2
N.D.
-0.1
+0.2
-0.6
stress
R2A with 3-octanone 10.6206 mM
+0.3
N.D.
-0.1
-0.5
+0.3
carbon source
L-Arabinose (C)
+0.4
N.D.
-0.1
-0.3
+0.7
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