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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS00710 and ABIE40_RS00715 overlap by 4 nucleotides
ABIE40_RS00715 and ABIE40_RS00720 are separated by 1 nucleotides
ABIE40_RS00720 and ABIE40_RS00725 overlap by 1 nucleotides
ABIE40_RS00725 and ABIE40_RS00730 are separated by 567 nucleotides
ABIE40_RS00710: ABIE40_RS00710 - Z1 domain-containing protein, at 146,892 to 149,585
_RS00710
ABIE40_RS00715: ABIE40_RS00715 - ATP-binding protein, at 149,582 to 151,060
_RS00715
ABIE40_RS00720: ABIE40_RS00720 - very short patch repair endonuclease, at 151,062 to 151,478
_RS00720
ABIE40_RS00725: ABIE40_RS00725 - DNA cytosine methyltransferase, at 151,478 to 153,097
_RS00725
ABIE40_RS00730: ABIE40_RS00730 - terminase small subunit, at 153,665 to 154,222
_RS00730
Group
Condition
ABIE40
_RS00710
ABIE40
_RS00715
ABIE40
_RS00720
ABIE40
_RS00725
ABIE40
_RS00730
carbon source
Glycolic Acid (C)
-0.2
-0.1
-0.3
-4.3
-0.0
carbon source
Gelatin (C)
+0.1
-0.0
-0.2
-4.3
-0.1
carbon source
Adenosine (C)
-0.1
-0.1
-0.2
-4.2
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
-0.0
-0.1
-4.3
-0.0
carbon source
pyruvate (C)
-0.1
+0.1
-0.3
-4.2
-0.1
carbon source
pyruvate (C)
-0.1
-0.1
-0.2
-4.2
+0.2
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.1
-0.2
-0.2
-3.8
-0.2
carbon source
D-Sorbitol (C)
-0.2
-0.0
+0.1
-4.2
-0.0
carbon source
D-Glucuronic Acid (C)
-0.1
-0.1
+0.1
-3.9
-0.2
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.0
-0.0
-3.9
-0.1
carbon source
D-Serine (C)
-0.1
-0.1
+0.1
-4.1
+0.2
carbon source
D-Glucose-6-Phosphate (C)
-0.1
-0.1
+0.2
-3.9
-0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.1
-0.1
-0.0
-3.6
-0.1
carbon source
L-Threonine (C)
-0.2
-0.2
-0.1
-3.7
+0.4
carbon source
casaminos (C)
+0.0
+0.2
+0.2
-3.6
-0.5
carbon source
L-Citrulline (C)
+0.2
+0.2
-0.3
-3.9
-0.1
carbon source
water (C)
+0.0
-0.1
-0.3
-3.5
+0.1
carbon source
D-Raffinose (C)
+0.1
-0.0
-0.1
-3.9
+0.2
carbon source
Itaconic Acid (C)
-0.2
-0.1
-0.2
-3.3
+0.1
carbon source
D-Trehalose (C)
+0.0
-0.1
-0.0
-3.6
+0.1
carbon source
L-Threonine (C)
-0.1
-0.2
-0.3
-3.3
+0.2
carbon source
L-Methionine (C)
-0.0
-0.0
-0.2
-3.7
+0.3
carbon source
Adenine (C)
-0.0
-0.0
+0.1
-3.5
-0.1
carbon source
Fumarate (C)
-0.1
+0.1
-0.2
-3.5
+0.3
stress
R2A with 3-octanone 15.9309 mM
-0.6
-0.3
+0.2
-2.4
-0.4
carbon source
D-Galactose (C)
-0.0
+0.1
+0.1
-3.8
+0.2
carbon source
D-Raffinose (C)
-0.0
-0.1
+0.1
-3.3
+0.2
carbon source
L-Tryptophan (C)
-0.1
-0.1
+0.0
-3.2
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.6
-0.3
+0.4
-2.1
-0.3
carbon source
L-Citrulline (C)
+0.3
+0.3
+0.3
-3.2
+0.0
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