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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS00495 and ABIE40_RS00500 are separated by 33 nucleotides
ABIE40_RS00500 and ABIE40_RS00505 are separated by 12 nucleotides
ABIE40_RS00505 and ABIE40_RS00510 overlap by 4 nucleotides
ABIE40_RS00510 and ABIE40_RS00515 are separated by 11 nucleotides
ABIE40_RS00495: ABIE40_RS00495 - DNA translocase FtsK, at 103,125 to 105,557
_RS00495
ABIE40_RS00500: ABIE40_RS00500 - GrpB family protein, at 105,591 to 106,088
_RS00500
ABIE40_RS00505: ABIE40_RS00505 - phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN, at 106,101 to 106,700
_RS00505
ABIE40_RS00510: ABIE40_RS00510 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 106,697 to 107,836
_RS00510
ABIE40_RS00515: ABIE40_RS00515 - DUF1045 domain-containing protein, at 107,848 to 108,543
_RS00515
Group
Condition
ABIE40
_RS00495
ABIE40
_RS00500
ABIE40
_RS00505
ABIE40
_RS00510
ABIE40
_RS00515
carbon source
casaminos (C)
-0.1
+0.4
-0.3
-0.2
-2.0
carbon source
L-Alanine (C)
+0.1
-0.2
-0.7
+0.1
-0.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
+0.1
-0.6
-0.2
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
+0.0
-0.9
-0.3
+0.4
carbon source
D-Lactate (C)
+0.1
+0.1
-0.2
-0.2
-0.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
+0.0
-0.5
-0.4
+0.1
carbon source
succinate (C)
+0.0
+0.1
-0.4
+0.0
-0.7
carbon source
a-Cyclodextrin (C)
+0.0
+0.1
+0.1
-0.1
-1.0
carbon source
Ethanol (C)
-0.3
+0.0
+0.0
+0.2
-0.7
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.3
-0.0
-0.6
-0.1
+0.4
carbon source
Ethanol (C)
+0.1
+0.0
+0.1
+0.2
-1.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.3
+0.3
-0.4
-0.4
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
+0.1
-0.7
-0.3
+0.5
stress
R2A with 3-octanone 15.9309 mM
-0.1
-0.1
-0.6
-0.6
+0.9
carbon source
L-Threonine (C)
+0.2
+0.3
-0.2
-0.1
-0.6
carbon source
Formate (C)
-0.2
+0.1
+0.2
+0.1
-0.6
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.3
+0.2
+0.2
+0.0
-0.6
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.1
-0.6
-0.1
+0.5
carbon source
Itaconic Acid (C)
+0.1
+0.3
+0.3
-0.3
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.2
+0.1
-0.2
-0.2
+0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.0
+0.1
-0.9
-0.0
+1.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
+0.1
-0.2
-0.2
+0.7
r2a no stress control
R2A no stress control
-0.1
+0.2
-0.4
+0.1
+0.6
stress
R2A with 3-octanone 10.6206 mM
-0.2
+0.1
+0.2
-0.1
+0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
+0.0
-0.3
-0.2
+0.9
carbon source
L-Tryptophan (C)
+0.3
+0.2
+0.2
+0.2
-0.4
carbon source
a-Cyclodextrin (C)
+0.3
+0.3
+0.5
+0.0
-0.4
carbon source
L-Tryptophan (C)
-0.3
+0.3
+0.4
+0.2
+0.3
carbon source
L-Asparagine (C)
-0.0
+0.2
+0.6
-0.0
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.0
+0.1
-0.0
-0.0
+1.1
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