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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS00460 and ABIE40_RS00465 are separated by 243 nucleotides
ABIE40_RS00465 and ABIE40_RS00470 are separated by 191 nucleotides
ABIE40_RS00470 and ABIE40_RS00475 are separated by 466 nucleotides
ABIE40_RS00475 and ABIE40_RS00480 are separated by 216 nucleotides
ABIE40_RS00460: ABIE40_RS00460 - transglycosylase domain-containing protein, at 90,908 to 93,235
_RS00460
ABIE40_RS00465: ABIE40_RS00465 - hypothetical protein, at 93,479 to 93,658
_RS00465
ABIE40_RS00470: ABIE40_RS00470 - SH3 domain-containing protein, at 93,850 to 94,683
_RS00470
ABIE40_RS00475: ABIE40_RS00475 - dipeptidase, at 95,150 to 96,535
_RS00475
ABIE40_RS00480: ABIE40_RS00480 - EAL domain-containing protein, at 96,752 to 99,130
_RS00480
Group
Condition
ABIE40
_RS00460
ABIE40
_RS00465
ABIE40
_RS00470
ABIE40
_RS00475
ABIE40
_RS00480
carbon source
casaminos (C)
-6.8
+0.5
-0.0
+0.3
+0.2
carbon source
L-Lysine (C)
-2.6
+0.1
-0.1
+0.2
+0.0
carbon source
L-Alanine (C)
-0.4
-0.8
-0.2
-0.1
-0.3
carbon source
D-Lactate (C)
-1.2
+0.1
-0.2
-0.2
-0.3
carbon source
Carnitine Hydrochloride (C)
-1.5
-0.0
-0.0
+0.1
-0.0
carbon source
L-Glutamine (C)
-1.0
-0.1
-0.1
+0.0
-0.2
carbon source
L-Tryptophan (C)
-1.4
+0.1
+0.0
-0.1
-0.0
carbon source
L-Arabinose (C)
-1.2
+0.4
-0.2
-0.2
-0.1
carbon source
D-Trehalose (C)
-0.4
-0.4
-0.1
+0.2
-0.3
carbon source
Fumarate (C)
-0.6
-0.4
-0.3
+0.3
+0.0
carbon source
L-Lysine (C)
-1.6
+0.3
+0.1
+0.3
+0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.9
+0.7
-0.1
-0.5
+0.0
carbon source
D-Fructose (C)
-0.9
+0.1
-0.1
+0.1
+0.1
carbon source
casaminos (C)
-1.1
+0.1
+0.1
+0.1
+0.1
stress
R2A with 3-octanone 15.9309 mM
-0.8
+0.4
+0.3
-0.2
-0.0
carbon source
Carnitine Hydrochloride (C)
-0.7
+0.3
-0.3
+0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.7
+0.3
+0.0
-0.1
+0.1
stress
R2A with 3-octanone 10.6206 mM
-0.7
+0.4
+0.1
-0.0
-0.1
stress
R2A with 3-octanone 10.6206 mM
-0.6
+0.4
+0.3
-0.2
-0.0
carbon source
Itaconic Acid (C)
-0.9
+0.3
+0.3
+0.2
+0.3
carbon source
Ethanol (C)
+0.2
+0.6
-0.4
+0.0
-0.3
carbon source
Glycolic Acid (C)
-0.6
+0.5
+0.1
+0.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.6
+0.5
+0.2
+0.1
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.6
+0.5
+0.3
-0.1
+0.2
carbon source
L-Arabinose (C)
-0.6
+0.4
+0.2
+0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.5
+0.4
-0.1
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.5
+0.7
+0.1
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
+0.9
+0.2
-0.1
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.8
+0.2
+0.3
-0.2
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.7
+0.2
-0.1
+0.1
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ABIE40_RS00470
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