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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS00060 and ABIE40_RS00065 are separated by 33 nucleotides
ABIE40_RS00065 and ABIE40_RS00070 are separated by 42 nucleotides
ABIE40_RS00070 and ABIE40_RS00075 are separated by 24 nucleotides
ABIE40_RS00075 and ABIE40_RS00080 are separated by 2 nucleotides
ABIE40_RS00060: ABIE40_RS00060 - hydroxyacid dehydrogenase, at 13,121 to 14,134
_RS00060
ABIE40_RS00065: ABIE40_RS00065 - Gfo/Idh/MocA family oxidoreductase, at 14,168 to 15,442
_RS00065
ABIE40_RS00070: ABIE40_RS00070 - sugar phosphate isomerase/epimerase family protein, at 15,485 to 16,315
_RS00070
ABIE40_RS00075: ABIE40_RS00075 - dihydrodipicolinate synthase family protein, at 16,340 to 17,506
_RS00075
ABIE40_RS00080: ABIE40_RS00080 - Gfo/Idh/MocA family oxidoreductase, at 17,509 to 18,657
_RS00080
Group
Condition
ABIE40
_RS00060
ABIE40
_RS00065
ABIE40
_RS00070
ABIE40
_RS00075
ABIE40
_RS00080
carbon source
D-Lactate (C)
+0.4
+0.8
+0.3
-0.1
+0.4
carbon source
D-Galactose (C)
+0.3
+0.4
+0.4
+0.4
+0.4
carbon source
D-Serine (C)
+0.5
+0.3
+0.3
+0.4
+0.4
carbon source
a-Cyclodextrin (C)
+0.3
+0.3
+0.5
+0.4
+0.5
carbon source
succinate (C)
+0.1
+0.2
+0.8
+0.5
+0.4
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.3
+0.4
+0.3
+0.5
+0.4
carbon source
L-Leucine (C)
+0.3
+0.3
+0.5
+0.5
+0.4
carbon source
L-Threonine (C)
+0.4
+0.2
+0.3
+0.4
+0.6
carbon source
Itaconic Acid (C)
+0.4
+0.4
+0.3
+0.5
+0.4
carbon source
L-Methionine (C)
+0.4
+0.4
+0.3
+0.4
+0.4
carbon source
L-Alanine (C)
+0.4
+0.3
+0.7
+0.3
+0.3
carbon source
Glycolic Acid (C)
+0.5
+0.4
+0.4
+0.4
+0.4
carbon source
Fumarate (C)
+0.5
+0.5
+0.3
+0.4
+0.3
carbon source
L-Lysine (C)
+0.4
+0.4
+0.3
+0.5
+0.4
carbon source
Formate (C)
+0.5
+0.2
+0.7
+0.3
+0.3
carbon source
L-Tryptophan (C)
+0.3
+0.2
+0.7
+0.4
+0.5
carbon source
Adenosine (C)
+0.3
+0.4
+0.7
+0.3
+0.4
carbon source
Itaconic Acid (C)
+0.2
+0.3
+0.6
+0.4
+0.6
carbon source
L-Threonine (C)
+0.4
+0.4
+0.2
+0.5
+0.6
carbon source
Formate (C)
+0.5
+0.4
+0.4
+0.3
+0.5
carbon source
pyruvate (C)
+0.4
+0.4
+0.6
+0.4
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
+0.4
+0.4
+0.7
+0.4
+0.3
carbon source
D-Raffinose (C)
+0.4
+0.4
+0.6
+0.4
+0.3
carbon source
D-Serine (C)
+0.4
+0.4
+0.3
+0.6
+0.4
carbon source
D-Galactose (C)
+0.3
+0.4
+0.5
+0.4
+0.5
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.4
+0.4
+0.5
+0.3
+0.6
carbon source
Gelatin (C)
+0.6
+0.3
+0.6
+0.5
+0.3
carbon source
casaminos (C)
+0.1
+0.3
+1.2
+0.5
+0.3
carbon source
4-Hydroxybenzoic Acid (C)
+0.4
+0.5
+0.8
+0.3
+0.5
carbon source
Thymidine (C)
+0.5
+0.4
+0.8
+0.5
+0.6
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