Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS29440 and ABID97_RS29445 are separated by 42 nucleotidesABID97_RS29445 and ABID97_RS29450 are separated by 46 nucleotidesABID97_RS29450 and ABID97_RS29455 are separated by 82 nucleotidesABID97_RS29455 and ABID97_RS29460 are separated by 12 nucleotides ABID97_RS29440: ABID97_RS29440 - MoaF C-terminal domain-containing protein, at 812,030 to 812,830 _RS29440 ABID97_RS29445: ABID97_RS29445 - nuclear transport factor 2 family protein, at 812,873 to 813,262 _RS29445 ABID97_RS29450: ABID97_RS29450 - aldehyde dehydrogenase family protein, at 813,309 to 814,811 _RS29450 ABID97_RS29455: ABID97_RS29455 - ABC transporter substrate-binding protein, at 814,894 to 816,114 _RS29455 ABID97_RS29460: ABID97_RS29460 - branched-chain amino acid ABC transporter permease, at 816,127 to 816,996 _RS29460
Group Condition ABID97_RS29440 ABID97_RS29445 ABID97_RS29450 ABID97_RS29455 ABID97_RS29460
carbon source L-tyrosine (C) +0.1 N.D. -0.7 -1.1 N.D.
carbon source L-Malic (C) -0.2 N.D. -0.4 -1.1 N.D.
carbon source Fumarate (C) -0.3 N.D. -0.8 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 N.D. -0.8 -0.7 N.D.
plant outgrowth control Plant outgrowth control -0.0 N.D. -1.0 -0.2 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.3 N.D. -0.0 -0.8 N.D.
carbon source propionate (C) -0.4 N.D. +0.1 -0.7 N.D.
carbon source casaminos (C) -0.4 N.D. -0.4 -0.3 N.D.
carbon source Tween 20 (C) -0.2 N.D. +0.0 -0.8 N.D.
carbon source butyrate (C) -0.4 N.D. -0.2 -0.4 N.D.
carbon source D-Gluconic Acid (C) -0.1 N.D. -0.4 -0.4 N.D.
carbon source L-Glutamine (C) +0.1 N.D. -0.3 -0.8 N.D.
carbon source D-Glucuronic Acid (C) -0.6 N.D. +0.3 -0.4 N.D.
carbon source propionate (C) -0.4 N.D. +0.3 -0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. -0.7 -0.2 N.D.
carbon source pyruvate (C) -0.0 N.D. +0.2 -0.8 N.D.
carbon source Tween 20 (C) -0.2 N.D. +0.2 -0.5 N.D.
carbon source D-Sorbitol (C) -0.1 N.D. +0.2 -0.6 N.D.
carbon source L-Histidine (C) -0.2 N.D. +0.5 -0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 N.D. -0.2 -0.7 N.D.
carbon source D-Glucose (C) -0.2 N.D. +0.5 -0.4 N.D.
phage V2_10 -0.3 N.D. -0.2 +0.5 N.D.
carbon source D-Serine (C) +0.2 N.D. +0.3 -0.5 N.D.
carbon source L-Tryptophan (C) -0.0 N.D. +0.6 -0.4 N.D.
carbon source D,L-Malic Acid (C) +0.0 N.D. +0.7 -0.5 N.D.
phage V2_10 -0.2 N.D. -0.1 +0.7 N.D.
carbon source D-Sorbitol (C) -0.4 N.D. +0.5 +0.4 N.D.
carbon source L-Proline (C) -0.1 N.D. +0.8 +0.1 N.D.
r2a outgrowth control R2A outgrowth control +0.2 N.D. +0.6 +0.2 N.D.
carbon source Glycolic Acid (C) -0.1 N.D. +0.6 +0.8 N.D.
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