Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS29420 and ABID97_RS29425 are separated by 192 nucleotidesABID97_RS29425 and ABID97_RS29430 are separated by 149 nucleotidesABID97_RS29430 and ABID97_RS29435 are separated by 70 nucleotidesABID97_RS29435 and ABID97_RS29440 are separated by 13 nucleotides ABID97_RS29420: ABID97_RS29420 - cupin domain-containing protein, at 807,838 to 808,281 _RS29420 ABID97_RS29425: ABID97_RS29425 - LysR family transcriptional regulator, at 808,474 to 809,388 _RS29425 ABID97_RS29430: ABID97_RS29430 - GMC family oxidoreductase N-terminal domain-containing protein, at 809,538 to 811,139 _RS29430 ABID97_RS29435: ABID97_RS29435 - SDR family oxidoreductase, at 811,210 to 812,016 _RS29435 ABID97_RS29440: ABID97_RS29440 - MoaF C-terminal domain-containing protein, at 812,030 to 812,830 _RS29440
Group Condition ABID97_RS29420 ABID97_RS29425 ABID97_RS29430 ABID97_RS29435 ABID97_RS29440
carbon source pyruvate (C) N.D. -0.5 -0.4 N.D. -0.3
carbon source D-Mannose (C) N.D. -0.4 -0.8 N.D. -0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.1 -0.8 N.D. -0.3
carbon source D,L-Malic Acid (C) N.D. -1.3 +0.1 N.D. -0.0
carbon source D-Galactose (C) N.D. -0.3 -1.0 N.D. +0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.8 +0.1 N.D. -0.3
carbon source D-Galactose (C) N.D. -0.6 -0.3 N.D. -0.2
carbon source D-Serine (C) N.D. -0.4 -0.4 N.D. -0.2
carbon source L-Fucose (C) N.D. -1.2 +0.0 N.D. +0.1
carbon source L-Glutamine (C) N.D. -1.0 -0.1 N.D. +0.1
carbon source butyrate (C) N.D. +0.1 -0.6 N.D. -0.4
carbon source D-Mannose (C) N.D. -1.1 -0.0 N.D. +0.4
carbon source D-Glucuronic Acid (C) N.D. -0.9 +0.9 N.D. -0.6
phage V1_10 N.D. -0.5 -0.3 N.D. +0.2
carbon source D-Serine (C) N.D. -0.9 +0.1 N.D. +0.2
carbon source L-Threonine (C) N.D. -1.0 +0.6 N.D. -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 +0.4 N.D. -0.1
carbon source L-Malic (C) N.D. +0.5 -0.5 N.D. -0.2
carbon source D-Fructose (C) N.D. -0.7 +0.5 N.D. -0.1
carbon source casaminos (C) N.D. -0.4 +0.6 N.D. -0.4
carbon source L-Leucine (C) N.D. -0.4 +0.4 N.D. -0.2
carbon source L-Alanine (C) N.D. +0.6 -0.3 N.D. -0.4
carbon source propionate (C) N.D. +0.3 +0.3 N.D. -0.4
carbon source D-Xylose (C) N.D. +0.2 +0.5 N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.7 -0.3 N.D. +0.0
carbon source Tween 20 (C) N.D. +0.3 +0.5 N.D. -0.2
r2a outgrowth control R2A outgrowth control N.D. +0.0 +1.1 N.D. -0.1
carbon source Ethanol (C) N.D. +0.6 +0.3 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +1.0 +0.4 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +1.3 +0.5 N.D. +0.7
remove
ABID97_RS29420
plot		 remove
ABID97_RS29425
plot		 remove
ABID97_RS29430		 remove
ABID97_RS29435
plot		 remove
ABID97_RS29440
plot