Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS29110 and ABID97_RS29115 are separated by 13 nucleotidesABID97_RS29115 and ABID97_RS29120 are separated by 109 nucleotidesABID97_RS29120 and ABID97_RS29125 are separated by 13 nucleotidesABID97_RS29125 and ABID97_RS29130 are separated by 100 nucleotides ABID97_RS29110: ABID97_RS29110 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 740,906 to 743,155 _RS29110 ABID97_RS29115: ABID97_RS29115 - (2Fe-2S)-binding protein, at 743,169 to 743,642 _RS29115 ABID97_RS29120: ABID97_RS29120 - LysR substrate-binding domain-containing protein, at 743,752 to 744,648 _RS29120 ABID97_RS29125: ABID97_RS29125 - flavin reductase family protein, at 744,662 to 744,955 _RS29125 ABID97_RS29130: ABID97_RS29130 - hypothetical protein, at 745,056 to 745,316 _RS29130
Group Condition ABID97_RS29110 ABID97_RS29115 ABID97_RS29120 ABID97_RS29125 ABID97_RS29130
carbon source L-tyrosine (C) +0.2 -0.9 -0.1 N.D. -0.8
carbon source L-Alanine (C) -0.2 -0.6 -0.0 N.D. +0.3
carbon source L-tyrosine (C) -0.1 -0.5 -0.2 N.D. +0.3
carbon source L-Alanine (C) +0.3 -1.3 +0.2 N.D. +0.3
carbon source L-Lactate (C) -0.1 -0.5 -0.1 N.D. +0.5
carbon source Fumarate (C) -0.1 -0.4 -0.1 N.D. +0.4
carbon source D-Sorbitol (C) -0.2 -0.5 +0.1 N.D. +0.4
carbon source Tween 20 (C) -0.1 +0.5 -0.2 N.D. -0.3
carbon source L-Lactate (C) -0.1 -0.2 -0.2 N.D. +0.5
carbon source D-Ribose (C) +0.1 -0.5 +0.1 N.D. +0.5
phage V1_10 -0.0 -0.3 -0.1 N.D. +0.8
carbon source 2-Deoxy-D-Ribose (C) +0.3 +0.3 +0.1 N.D. -0.3
plant outgrowth control Plant outgrowth control -0.0 +0.7 -0.0 N.D. -0.2
carbon source D-Arabinose (C) -0.0 +0.3 -0.2 N.D. +0.5
carbon source D-Arabinose (C) +0.2 -0.4 +0.2 N.D. +0.6
carbon source D-Fructose (C) -0.0 +0.2 -0.2 N.D. +0.6
carbon source D-Gluconic Acid (C) +0.3 -0.3 +0.1 N.D. +0.5
carbon source D-Glucose (C) +0.1 +0.4 -0.1 N.D. +0.3
carbon source L-Fucose (C) -0.1 +0.5 -0.0 N.D. +0.4
r2a outgrowth control R2A outgrowth control +0.0 +0.4 -0.1 N.D. +0.4
carbon source D-Glucuronic Acid (C) +0.3 +0.5 -0.2 N.D. +0.2
carbon source L-Glutamine (C) -0.1 +0.2 -0.1 N.D. +0.8
carbon source L-Tryptophan (C) -0.1 +0.5 -0.1 N.D. +0.5
carbon source Adenine (C) +0.2 +0.4 -0.1 N.D. +0.5
carbon source Gly-Glu (C) -0.0 +0.8 +0.1 N.D. +0.2
carbon source succinate (C) +0.1 +0.5 +0.0 N.D. +0.5
carbon source D,L-Malic Acid (C) -0.1 +0.7 +0.1 N.D. +0.4
carbon source D,L-Lactate (C) +0.2 +0.7 +0.2 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.5 +0.1 N.D. +0.6
carbon source L-Threonine (C) +0.2 +0.8 +0.0 N.D. +0.5
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ABID97_RS29110
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ABID97_RS29115
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ABID97_RS29125
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ABID97_RS29130
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