Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS29035 and ABID97_RS29040 overlap by 4 nucleotidesABID97_RS29040 and ABID97_RS29045 are separated by 168 nucleotidesABID97_RS29045 and ABID97_RS29050 overlap by 4 nucleotidesABID97_RS29050 and ABID97_RS29055 overlap by 4 nucleotides ABID97_RS29035: ABID97_RS29035 - 3-isopropylmalate dehydrogenase, at 724,963 to 726,042 _RS29035 ABID97_RS29040: ABID97_RS29040 - IclR family transcriptional regulator, at 726,039 to 726,845 _RS29040 ABID97_RS29045: ABID97_RS29045 - tripartite tricarboxylate transporter substrate binding protein, at 727,014 to 728,030 _RS29045 ABID97_RS29050: ABID97_RS29050 - enoyl-CoA hydratase/isomerase family protein, at 728,027 to 728,833 _RS29050 ABID97_RS29055: ABID97_RS29055 - acetate--CoA ligase family protein, at 728,830 to 730,926 _RS29055
Group Condition ABID97_RS29035 ABID97_RS29040 ABID97_RS29045 ABID97_RS29050 ABID97_RS29055
carbon source D,L-Malic Acid (C) -0.6 -0.8 -0.4 -1.9 -0.4
carbon source L-Alanine (C) -0.9 -0.2 -0.4 -0.3 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -0.1 -1.2 -0.5 -0.7
carbon source L-Fucose (C) -0.1 -0.5 -0.5 -0.5 -0.1
carbon source casaminos (C) -0.3 +0.0 -0.3 -0.5 -0.4
carbon source acetate (C) -0.4 +0.2 -0.0 -1.2 -0.1
carbon source Gly-Glu (C) -0.6 +0.0 -0.1 -0.6 -0.1
carbon source D-Glucose (C) -0.6 -0.1 -0.0 -0.4 -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.0 -0.3 -0.8 +0.0
carbon source L-Arabinose (C) -0.3 -0.2 -0.0 -0.8 +0.0
carbon source L-Glutamine (C) -0.4 +0.3 -0.4 -0.4 -0.4
carbon source D-Sorbitol (C) -0.5 +0.1 -0.2 -0.5 -0.1
carbon source L-Arabinose (C) -0.2 -0.4 +0.1 -0.4 -0.2
carbon source pyruvate (C) -0.2 -0.4 -0.3 -0.4 +0.1
carbon source Glucuronamide (C) -0.2 +0.1 -0.2 -0.9 +0.2
carbon source D-Serine (C) +0.0 -0.3 +0.2 -0.5 -0.5
r2a outgrowth control R2A outgrowth control +0.0 -0.3 -0.2 -0.7 +0.3
carbon source L-Malic (C) -0.3 +0.4 -0.3 -0.5 +0.0
carbon source L-Threonine (C) -0.6 +0.3 +0.2 -0.1 -0.3
carbon source L-Lactate (C) -0.4 -0.4 +0.4 +0.4 -0.1
carbon source D-Galactose (C) -0.3 +0.5 -0.2 +0.6 -0.6
carbon source butyrate (C) -0.9 -0.1 +0.1 +0.2 +0.7
carbon source L-Histidine (C) -0.1 +0.4 -0.0 -0.5 +0.4
phage V1_1 -0.2 +0.2 +0.3 -0.4 +0.4
phage V2_10 +0.6 -0.2 +0.4 -0.0 -0.4
carbon source propionate (C) -0.6 +0.2 +0.6 +0.3 -0.3
phage V1_1 +0.3 -0.1 +0.5 +0.1 -0.4
phage V2_100 -0.4 -0.5 +0.5 +0.7 +0.1
carbon source L-Alanine (C) +0.3 -0.2 -0.3 +0.3 +0.4
carbon source L-tyrosine (C) -0.7 -0.2 +0.6 +0.4 +0.3
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