Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS29010 and ABID97_RS29015 are separated by 184 nucleotidesABID97_RS29015 and ABID97_RS29020 are separated by 101 nucleotidesABID97_RS29020 and ABID97_RS29025 are separated by 34 nucleotidesABID97_RS29025 and ABID97_RS29030 are separated by 21 nucleotides ABID97_RS29010: ABID97_RS29010 - SMP-30/gluconolactonase/LRE family protein, at 719,782 to 720,687 _RS29010 ABID97_RS29015: ABID97_RS29015 - transcriptional regulator GcvA, at 720,872 to 721,768 _RS29015 ABID97_RS29020: ABID97_RS29020 - tripartite tricarboxylate transporter substrate binding protein, at 721,870 to 722,856 _RS29020 ABID97_RS29025: ABID97_RS29025 - 3-isopropylmalate dehydratase large subunit, at 722,891 to 724,312 _RS29025 ABID97_RS29030: ABID97_RS29030 - 3-isopropylmalate dehydratase small subunit, at 724,334 to 724,936 _RS29030
Group Condition ABID97_RS29010 ABID97_RS29015 ABID97_RS29020 ABID97_RS29025 ABID97_RS29030
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.8 +0.0 -0.2 -1.4
carbon source butyrate (C) +0.3 -0.5 +0.2 +0.1 -2.3
carbon source L-Phenylalanine (C) -0.2 -1.3 -0.1 -0.1 -0.5
carbon source D-Glucose (C) -0.0 -1.2 +0.2 -0.2 -0.9
phage V2_100 +0.2 -2.4 +0.3 +0.1 -0.1
carbon source propionate (C) +0.3 -1.6 +0.2 -0.1 -0.7
carbon source 2-Deoxy-D-Ribose (C) +0.1 -1.2 +0.0 -0.0 -0.6
carbon source D-Mannose (C) -0.1 -2.1 +0.0 +0.2 +0.3
carbon source L-Histidine (C) +0.1 -0.3 -0.0 -0.3 -1.2
carbon source Glucuronamide (C) -0.1 -1.3 -0.2 -0.1 +0.2
carbon source Formate (C) -0.1 -1.1 -0.3 +0.2 -0.3
carbon source D,L-Malic Acid (C) +0.0 +0.7 +0.1 +0.2 -2.1
carbon source succinate (C) +0.1 -0.3 +0.3 -0.0 -1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.9 +0.3 -0.9 -1.3
phage V1_10 -0.1 +0.4 -0.0 -0.2 -1.0
carbon source L-Leucine (C) +0.1 -1.4 -0.0 +0.2 +0.1
carbon source Glycerol (C) -0.1 +0.8 -0.2 -0.1 -1.4
carbon source D-Arabinose (C) +0.0 +0.6 +0.1 -0.0 -1.4
carbon source D,L-Malic Acid (C) +0.1 -0.8 -0.4 -0.0 +0.5
carbon source D-Galactose (C) -0.2 +0.6 -0.2 -0.3 -0.4
carbon source L-Arabinose (C) -0.1 +0.5 -0.1 +0.1 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 +0.6 -0.4 -0.6
carbon source D,L-Lactate (C) +0.0 +0.7 -0.1 +0.1 -0.9
plant outgrowth control Plant outgrowth control -0.1 +1.0 +0.1 -0.3 -0.3
carbon source propionate (C) +0.1 +1.0 -0.1 +0.2 -0.4
phage V1_1 -0.1 +1.0 +0.1 +0.2 -0.3
plant outgrowth control Plant outgrowth control -0.2 +1.3 -0.0 +0.5 -0.4
carbon source L-tyrosine (C) +0.2 +1.3 -0.3 +0.9 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +1.9 +0.2 +0.0 -0.7
carbon source D-Mannose (C) +0.1 +0.8 +0.0 +0.5 +0.3
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