Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28930 and ABID97_RS28935 are separated by 606 nucleotidesABID97_RS28935 and ABID97_RS28940 are separated by 81 nucleotidesABID97_RS28940 and ABID97_RS28945 are separated by 234 nucleotidesABID97_RS28945 and ABID97_RS28950 are separated by 10 nucleotides ABID97_RS28930: ABID97_RS28930 - AAA family ATPase, at 705,122 to 706,279 _RS28930 ABID97_RS28935: ABID97_RS28935 - replication initiation protein, at 706,886 to 708,262 _RS28935 ABID97_RS28940: ABID97_RS28940 - UBP-type zinc finger domain-containing protein, at 708,344 to 708,652 _RS28940 ABID97_RS28945: ABID97_RS28945 - tripartite tricarboxylate transporter TctB family protein, at 708,887 to 709,309 _RS28945 ABID97_RS28950: ABID97_RS28950 - tripartite tricarboxylate transporter permease, at 709,320 to 710,843 _RS28950
Group Condition ABID97_RS28930 ABID97_RS28935 ABID97_RS28940 ABID97_RS28945 ABID97_RS28950
carbon source L-Alanine (C) N.D. N.D. +0.0 -1.7 +0.2
carbon source D-Mannose (C) N.D. N.D. -0.3 -1.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.2 -1.5 +0.2
carbon source D-Glucuronic Acid (C) N.D. N.D. +0.0 -0.6 -0.6
carbon source D-Mannose (C) N.D. N.D. -0.1 -1.2 +0.1
carbon source Fumarate (C) N.D. N.D. -0.0 -1.3 +0.2
carbon source L-Alanine (C) N.D. N.D. -0.2 -0.9 +0.1
phage V2_10 N.D. N.D. +0.2 -1.3 +0.1
carbon source propionate (C) N.D. N.D. -0.2 -0.8 +0.1
carbon source L-Proline (C) N.D. N.D. -0.0 -0.9 +0.1
carbon source L-Asparagine (C) N.D. N.D. -0.3 -0.6 +0.0
carbon source L-Phenylalanine (C) N.D. N.D. +0.2 -1.2 +0.2
carbon source L-Leucine (C) N.D. N.D. -0.0 -0.8 +0.1
phage V1_1 N.D. N.D. +0.1 -0.9 +0.1
phage V1_1 N.D. N.D. +0.0 -0.8 +0.1
phage V2_100 N.D. N.D. +0.5 -1.7 +0.6
carbon source Glucuronamide (C) N.D. N.D. +0.4 -0.7 -0.0
carbon source D-Serine (C) N.D. N.D. -0.6 +0.4 -0.0
phage V2_1 N.D. N.D. +0.1 -0.6 +0.2
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.2 +0.6 -0.2
carbon source L-Glutamine (C) N.D. N.D. -0.2 +0.8 -0.1
carbon source Gly-Glu (C) N.D. N.D. -0.3 +0.5 +0.2
phage V1_10 N.D. N.D. -0.3 +0.7 -0.0
plant outgrowth control Plant outgrowth control N.D. N.D. -0.2 +0.7 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.6 +1.2 +0.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.1 +0.6 +0.1
plant outgrowth control Plant outgrowth control N.D. N.D. +0.1 +0.7 +0.1
carbon source L-tyrosine (C) N.D. N.D. -0.1 +0.9 +0.2
carbon source propionate (C) N.D. N.D. -0.4 +1.6 -0.1
carbon source D-Arabinose (C) N.D. N.D. +0.0 +1.0 +0.1
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ABID97_RS28930
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ABID97_RS28935
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