Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28905 and ABID97_RS28910 are separated by 112 nucleotidesABID97_RS28910 and ABID97_RS28915 overlap by 4 nucleotidesABID97_RS28915 and ABID97_RS28920 are separated by 357 nucleotidesABID97_RS28920 and ABID97_RS28925 are separated by 256 nucleotides ABID97_RS28905: ABID97_RS28905 - LysR substrate-binding domain-containing protein, at 699,769 to 700,680 _RS28905 ABID97_RS28910: ABID97_RS28910 - phage integrase family protein, at 700,793 to 702,682 _RS28910 ABID97_RS28915: ABID97_RS28915 - hypothetical protein, at 702,679 to 702,939 _RS28915 ABID97_RS28920: ABID97_RS28920 - hypothetical protein, at 703,297 to 703,527 _RS28920 ABID97_RS28925: ABID97_RS28925 - ParB/RepB/Spo0J family partition protein, at 703,784 to 704,866 _RS28925
Group Condition ABID97_RS28905 ABID97_RS28910 ABID97_RS28915 ABID97_RS28920 ABID97_RS28925
carbon source butyrate (C) -0.5 -0.5 N.D. N.D. N.D.
carbon source L-Malic (C) -0.4 -0.3 N.D. N.D. N.D.
carbon source L-Leucine (C) +0.1 -0.6 N.D. N.D. N.D.
carbon source D-Serine (C) -0.5 +0.2 N.D. N.D. N.D.
carbon source L-Arabinose (C) -0.6 +0.4 N.D. N.D. N.D.
carbon source L-Fucose (C) -0.4 +0.3 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.4 N.D. N.D. N.D.
carbon source D-Serine (C) -0.3 +0.3 N.D. N.D. N.D.
carbon source D-Galactose (C) -0.3 +0.4 N.D. N.D. N.D.
carbon source Ethanol (C) -0.3 +0.4 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.5 +0.6 N.D. N.D. N.D.
carbon source D-Sorbitol (C) -0.2 +0.4 N.D. N.D. N.D.
carbon source Ethanol (C) -0.3 +0.5 N.D. N.D. N.D.
carbon source D-Galactose (C) -0.3 +0.6 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) -0.2 +0.6 N.D. N.D. N.D.
carbon source L-Arabinose (C) -0.1 +0.6 N.D. N.D. N.D.
phage V1_10 -0.1 +0.7 N.D. N.D. N.D.
carbon source Formate (C) +0.2 +0.3 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) +0.2 +0.3 N.D. N.D. N.D.
phage V1_10 -0.1 +0.7 N.D. N.D. N.D.
carbon source L-Histidine (C) +0.0 +0.6 N.D. N.D. N.D.
carbon source L-tyrosine (C) +0.1 +0.5 N.D. N.D. N.D.
carbon source Glycerol (C) +0.3 +0.4 N.D. N.D. N.D.
carbon source propionate (C) +0.1 +0.6 N.D. N.D. N.D.
carbon source D-Sorbitol (C) +0.1 +0.6 N.D. N.D. N.D.
phage V2_10 +0.2 +0.6 N.D. N.D. N.D.
carbon source D-Fructose (C) +0.0 +0.9 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.0 +1.0 N.D. N.D. N.D.
carbon source D-Fructose (C) +0.5 +0.8 N.D. N.D. N.D.
phage V2_100 -0.5 +2.4 N.D. N.D. N.D.
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ABID97_RS28905
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ABID97_RS28910
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ABID97_RS28925
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