Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28880 and ABID97_RS28885 are separated by 106 nucleotidesABID97_RS28885 and ABID97_RS28890 overlap by 4 nucleotidesABID97_RS28890 and ABID97_RS28895 are separated by 18 nucleotidesABID97_RS28895 and ABID97_RS28900 are separated by 44 nucleotides ABID97_RS28880: ABID97_RS28880 - tripartite tricarboxylate transporter substrate binding protein, at 694,643 to 695,623 _RS28880 ABID97_RS28885: ABID97_RS28885 - tripartite tricarboxylate transporter substrate binding protein, at 695,730 to 696,701 _RS28885 ABID97_RS28890: ABID97_RS28890 - citryl-CoA lyase, at 696,698 to 697,504 _RS28890 ABID97_RS28895: ABID97_RS28895 - dioxygenase, at 697,523 to 698,440 _RS28895 ABID97_RS28900: ABID97_RS28900 - CoA transferase, at 698,485 to 699,642 _RS28900
Group Condition ABID97_RS28880 ABID97_RS28885 ABID97_RS28890 ABID97_RS28895 ABID97_RS28900
r2a outgrowth control R2A outgrowth control -0.2 +0.2 -0.1 -0.8 -0.7
carbon source L-Histidine (C) -0.2 -0.3 +0.2 -0.1 -0.4
carbon source Glucuronamide (C) +0.1 +0.0 +0.0 -0.6 -0.2
carbon source D,L-Malic Acid (C) -0.4 -0.0 +0.2 -0.3 +0.1
carbon source L-Fucose (C) +0.1 -0.2 +0.2 -0.1 -0.4
carbon source L-tyrosine (C) -0.2 +0.1 +0.4 -0.2 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.4 +0.2 +0.3 +0.1 -0.2
carbon source L-Fucose (C) -0.3 -0.2 +0.4 +0.1 +0.1
carbon source L-tyrosine (C) -0.4 +0.2 +0.1 -0.0 +0.2
carbon source D-Glucose (C) +0.2 +0.1 -0.6 +0.4 -0.0
carbon source butyrate (C) +0.2 -0.2 -0.2 +0.3 +0.1
carbon source D-Xylose (C) -0.4 -0.1 +0.5 +0.2 -0.1
carbon source D-Ribose (C) +0.1 +0.1 +0.6 -0.6 -0.0
carbon source Glucuronamide (C) -0.4 +0.3 -0.2 +0.6 -0.1
phage V2_1 -0.3 -0.1 +0.3 +0.1 +0.2
carbon source a-Ketoglutaric (C) +0.1 -0.1 -0.3 +0.5 +0.1
carbon source D,L-Lactate (C) -0.3 +0.2 +0.5 -0.2 +0.1
carbon source L-Arabinose (C) +0.6 +0.0 +0.1 -0.1 -0.2
carbon source Glycerol (C) +0.3 -0.2 +0.3 -0.0 +0.2
plant outgrowth control Plant outgrowth control +0.4 -0.3 +0.3 +0.2 +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.5 -0.1 +0.5 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.2 +0.5 +0.2 -0.2
carbon source L-Leucine (C) -0.1 +0.1 +0.5 +0.3 +0.2
carbon source D-Serine (C) +0.2 +0.3 +0.3 +0.2 -0.1
carbon source D-Arabinose (C) -0.1 +0.2 +0.3 +0.2 +0.2
carbon source propionate (C) -0.0 +1.1 +0.0 -0.5 +0.4
phage V2_100 -0.6 +0.5 -0.0 +1.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.0 +0.9 +0.2 +0.2
carbon source propionate (C) +0.4 +1.2 +0.2 -0.4 -0.1
carbon source D-Glucuronic Acid (C) +0.2 +1.3 +0.0 +0.1 +0.1
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ABID97_RS28880
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