Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28775 and ABID97_RS28780 are separated by 12 nucleotidesABID97_RS28780 and ABID97_RS28785 are separated by 59 nucleotidesABID97_RS28785 and ABID97_RS28790 are separated by 76 nucleotidesABID97_RS28790 and ABID97_RS28795 are separated by 209 nucleotides ABID97_RS28775: ABID97_RS28775 - branched-chain amino acid ABC transporter ATP-binding protein/permease, at 672,441 to 674,231 _RS28775 ABID97_RS28780: ABID97_RS28780 - branched-chain amino acid ABC transporter permease, at 674,244 to 675,116 _RS28780 ABID97_RS28785: ABID97_RS28785 - ABC transporter substrate-binding protein, at 675,176 to 675,985 _RS28785 ABID97_RS28790: ABID97_RS28790 - ABC transporter substrate-binding protein, at 676,062 to 676,388 _RS28790 ABID97_RS28795: ABID97_RS28795 - SMP-30/gluconolactonase/LRE family protein, at 676,598 to 677,473 _RS28795
Group Condition ABID97_RS28775 ABID97_RS28780 ABID97_RS28785 ABID97_RS28790 ABID97_RS28795
carbon source 2-Deoxy-D-Ribose (C) -0.7 -0.8 N.D. N.D. -2.0
carbon source L-tyrosine (C) -0.9 -0.6 N.D. N.D. -1.5
carbon source 2-Deoxy-D-Ribose (C) -0.8 -0.3 N.D. N.D. -2.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.5 N.D. N.D. -0.2
plant outgrowth control Plant outgrowth control -0.2 -0.5 N.D. N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.9 N.D. N.D. -0.0
carbon source Formate (C) -0.4 -0.7 N.D. N.D. -0.1
carbon source L-tyrosine (C) -0.0 -0.7 N.D. N.D. -0.3
carbon source Ethanol (C) -0.4 -0.4 N.D. N.D. -0.2
carbon source L-Histidine (C) +0.2 -0.8 N.D. N.D. -0.3
carbon source butyrate (C) -0.3 -0.5 N.D. N.D. -0.1
carbon source Gly-Glu (C) -0.2 -0.6 N.D. N.D. -0.1
carbon source D-Galactose (C) -0.3 -0.2 N.D. N.D. -0.4
r2a outgrowth control R2A outgrowth control -0.3 -0.1 N.D. N.D. -0.5
carbon source D-Sorbitol (C) -0.1 -0.6 N.D. N.D. -0.0
carbon source D-Galactose (C) -0.3 -0.1 N.D. N.D. -0.4
carbon source L-Alanine (C) -0.3 -0.3 N.D. N.D. -0.1
carbon source Ethanol (C) -0.4 -0.3 N.D. N.D. -0.1
carbon source L-Glutamine (C) -0.1 -0.3 N.D. N.D. -0.2
carbon source L-Asparagine (C) -0.2 -0.2 N.D. N.D. -0.3
carbon source L-Leucine (C) +0.1 -0.5 N.D. N.D. -0.3
carbon source casaminos (C) -0.2 -0.5 N.D. N.D. +0.1
carbon source butyrate (C) -0.6 +0.1 N.D. N.D. -0.2
carbon source propionate (C) +0.2 -0.3 N.D. N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 +0.4 N.D. N.D. -0.2
carbon source Formate (C) +0.0 -0.6 N.D. N.D. +0.2
carbon source L-Threonine (C) -0.2 +0.2 N.D. N.D. -0.2
carbon source D-Gluconic Acid (C) -0.1 +0.5 N.D. N.D. -0.2
carbon source L-Alanine (C) +0.7 -0.3 N.D. N.D. -0.0
phage V2_100 +0.2 +0.3 N.D. N.D. +0.1
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ABID97_RS28775
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ABID97_RS28780
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ABID97_RS28795
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