Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS28735 and ABID97_RS28740 are separated by 91 nucleotidesABID97_RS28740 and ABID97_RS28745 are separated by 84 nucleotidesABID97_RS28745 and ABID97_RS28750 are separated by 2 nucleotidesABID97_RS28750 and ABID97_RS28755 overlap by 4 nucleotides ABID97_RS28735: ABID97_RS28735 - alpha/beta hydrolase, at 663,577 to 664,392 _RS28735 ABID97_RS28740: ABID97_RS28740 - NADH:flavin oxidoreductase/NADH oxidase, at 664,484 to 665,599 _RS28740 ABID97_RS28745: ABID97_RS28745 - GMC family oxidoreductase N-terminal domain-containing protein, at 665,684 to 667,282 _RS28745 ABID97_RS28750: ABID97_RS28750 - FAD-binding oxidoreductase, at 667,285 to 668,685 _RS28750 ABID97_RS28755: ABID97_RS28755 - shikimate dehydrogenase, at 668,682 to 669,497 _RS28755
Group Condition ABID97_RS28735 ABID97_RS28740 ABID97_RS28745 ABID97_RS28750 ABID97_RS28755
carbon source D-Mannose (C) -0.2 -1.0 -0.3 N.D. -0.1
carbon source casaminos (C) +0.0 -1.3 -0.2 N.D. +0.3
carbon source Glycolic Acid (C) +0.8 -1.2 -0.5 N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.5 -0.2 N.D. -0.6
carbon source L-Histidine (C) +0.1 -0.6 -0.3 N.D. -0.3
carbon source Gly-Glu (C) +0.3 -0.8 +0.0 N.D. -0.5
carbon source L-Alanine (C) +0.0 -0.1 -0.2 N.D. -0.7
phage V2_100 -0.2 +0.1 +0.0 N.D. -0.8
carbon source Formate (C) +0.3 -1.1 -0.1 N.D. +0.0
carbon source Glucuronamide (C) +0.6 -1.1 -0.4 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.1 -0.4 N.D. -0.3
carbon source Adenine (C) +0.3 -0.7 -0.0 N.D. -0.3
carbon source Glucuronamide (C) +0.2 -0.1 -0.2 N.D. -0.6
carbon source Formate (C) +0.4 -0.4 -0.4 N.D. -0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.4 -0.2 N.D. -0.3
phage V2_10 +0.2 -0.4 +0.2 N.D. -0.4
carbon source D,L-Malic Acid (C) -0.2 -0.4 -0.1 N.D. +0.3
carbon source D-Xylose (C) +0.2 +0.1 -0.3 N.D. -0.4
carbon source Ethanol (C) +0.2 -0.5 -0.2 N.D. +0.2
r2a outgrowth control R2A outgrowth control -0.1 -0.6 -0.1 N.D. +0.7
control NP -0.2 +0.3 +0.1 N.D. -0.3
carbon source propionate (C) +0.3 +0.4 +0.2 N.D. -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.7 -0.7 N.D. +0.5
carbon source D-Serine (C) +0.1 +0.4 -0.2 N.D. +0.3
carbon source butyrate (C) +0.4 -0.3 -0.3 N.D. +0.9
carbon source L-tyrosine (C) -0.0 +0.4 +0.1 N.D. +0.6
carbon source a-Ketoglutaric (C) -0.1 +1.1 -0.0 N.D. +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.5 +1.7 +2.2 N.D. -1.2
carbon source L-tyrosine (C) +0.5 +1.3 +2.5 N.D. -0.8
carbon source 2-Deoxy-D-Ribose (C) +0.6 +1.6 +2.6 N.D. -1.0
remove
ABID97_RS28735
plot		 remove
ABID97_RS28740
plot		 remove
ABID97_RS28745		 remove
ABID97_RS28750
plot		 remove
ABID97_RS28755
plot