Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28695 and ABID97_RS28700 overlap by 4 nucleotidesABID97_RS28700 and ABID97_RS28705 are separated by 25 nucleotidesABID97_RS28705 and ABID97_RS28710 are separated by 2 nucleotidesABID97_RS28710 and ABID97_RS28715 overlap by 4 nucleotides ABID97_RS28695: ABID97_RS28695 - VOC family protein, at 656,083 to 656,490 _RS28695 ABID97_RS28700: ABID97_RS28700 - AraC family transcriptional regulator, at 656,487 to 656,972 _RS28700 ABID97_RS28705: ABID97_RS28705 - aldehyde oxidoreductase molybdenum-binding subunit PaoC, at 656,998 to 659,208 _RS28705 ABID97_RS28710: ABID97_RS28710 - xanthine dehydrogenase family protein subunit M, at 659,211 to 660,161 _RS28710 ABID97_RS28715: ABID97_RS28715 - aldehyde dehydrogenase iron-sulfur subunit PaoA, at 660,158 to 660,805 _RS28715
Group Condition ABID97_RS28695 ABID97_RS28700 ABID97_RS28705 ABID97_RS28710 ABID97_RS28715
carbon source 2-Deoxy-D-Ribose (C) -0.2 N.D. -0.8 -0.8 -0.7
carbon source L-tyrosine (C) +0.2 N.D. -0.7 -1.1 -0.6
carbon source 2-Deoxy-D-Ribose (C) +0.1 N.D. -0.8 -0.9 -0.6
carbon source Glycolic Acid (C) -0.2 N.D. -0.6 -0.5 -0.8
carbon source L-Histidine (C) -0.4 N.D. -0.5 -0.3 -0.5
carbon source D-Galactose (C) -0.1 N.D. -0.4 -0.2 -1.0
carbon source D-Mannose (C) -0.6 N.D. -0.2 -0.1 -0.8
carbon source pyruvate (C) -0.8 N.D. -0.3 -0.1 -0.2
carbon source Glucuronamide (C) -0.7 N.D. -0.3 -0.1 -0.3
carbon source L-Lactate (C) -0.2 N.D. -0.2 -0.2 -0.6
phage V2_10 -0.5 N.D. +0.0 -0.5 -0.2
carbon source Tween 20 (C) -1.0 N.D. -0.1 +0.0 -0.1
carbon source L-Arabinose (C) -0.5 N.D. -0.1 -0.1 -0.4
carbon source D,L-Lactate (C) -0.7 N.D. -0.0 -0.0 -0.4
carbon source L-Glutamine (C) -0.4 N.D. -0.3 -0.0 -0.3
phage V1_10 -0.3 N.D. -0.3 -0.3 -0.2
carbon source D-Fructose (C) -0.7 N.D. -0.2 +0.1 +0.1
carbon source L-Arabinose (C) +0.5 N.D. -0.4 +0.1 -0.7
carbon source L-Asparagine (C) -0.1 N.D. -0.2 +0.3 -0.5
carbon source butyrate (C) +0.4 N.D. -0.1 -0.0 -0.6
carbon source Glycolic Acid (C) +0.2 N.D. +0.0 +0.2 -0.8
r2a outgrowth control R2A outgrowth control -0.3 N.D. +0.5 -0.2 -0.1
carbon source Glucuronamide (C) -0.6 N.D. +0.3 +0.0 +0.2
carbon source Adenine (C) +0.3 N.D. +0.4 +0.0 -0.4
r2a outgrowth control R2A outgrowth control -0.3 N.D. +0.3 -0.0 +0.5
carbon source D-Ribose (C) -0.3 N.D. +0.2 +0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. -0.3 -0.0 +1.0
carbon source propionate (C) +0.7 N.D. -0.2 +0.9 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. +0.0 +0.3 +0.8
carbon source propionate (C) +3.1 N.D. +0.2 +0.1 +0.1
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