Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28675 and ABID97_RS28680 are separated by 33 nucleotidesABID97_RS28680 and ABID97_RS28685 are separated by 141 nucleotidesABID97_RS28685 and ABID97_RS28690 are separated by 220 nucleotidesABID97_RS28690 and ABID97_RS28695 are separated by 15 nucleotides ABID97_RS28675: ABID97_RS28675 - hypothetical protein, at 653,430 to 654,017 _RS28675 ABID97_RS28680: ABID97_RS28680 - LysR family transcriptional regulator, at 654,051 to 654,965 _RS28680 ABID97_RS28685: ABID97_RS28685 - RidA family protein, at 655,107 to 655,508 _RS28685 ABID97_RS28690: ABID97_RS28690 - hypothetical protein, at 655,729 to 656,067 _RS28690 ABID97_RS28695: ABID97_RS28695 - VOC family protein, at 656,083 to 656,490 _RS28695
Group Condition ABID97_RS28675 ABID97_RS28680 ABID97_RS28685 ABID97_RS28690 ABID97_RS28695
phage V2_100 -1.0 -0.3 -0.3 -0.1 +0.2
carbon source L-Alanine (C) -0.8 -0.2 -0.0 +0.2 -0.1
carbon source pyruvate (C) -0.1 +0.0 +0.2 -0.2 -0.8
carbon source Glucuronamide (C) +0.4 -0.2 +0.0 -0.2 -0.6
carbon source pyruvate (C) +0.4 -0.0 -0.0 -0.1 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 +0.4 +0.1 +0.0 +0.2
carbon source Tween 20 (C) +0.5 +0.2 +0.2 -0.2 -1.0
phage V2_10 +0.4 -0.2 -0.1 +0.2 -0.5
carbon source butyrate (C) -0.7 -0.1 +0.2 +0.0 +0.4
carbon source L-tyrosine (C) +1.1 +0.0 -0.5 -0.5 -0.2
carbon source Glucuronamide (C) +0.4 -0.1 +0.0 +0.1 -0.7
carbon source Ethanol (C) +0.7 -0.3 +0.2 -0.2 -0.4
carbon source L-Phenylalanine (C) +0.3 +0.4 -0.2 -0.1 -0.3
carbon source L-Histidine (C) +0.6 -0.0 +0.2 -0.2 -0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.9 -0.1 +0.1 -0.4 -0.2
carbon source Glycerol (C) +0.3 +0.3 +0.4 -0.2 -0.3
carbon source L-Arabinose (C) +0.2 +0.1 -0.2 -0.2 +0.5
carbon source propionate (C) +0.2 -0.2 +0.1 -0.2 +0.7
carbon source D-Ribose (C) +0.7 -0.1 +0.1 -0.0 -0.2
carbon source Ethanol (C) +0.6 +0.1 +0.1 -0.2 +0.2
carbon source succinate (C) +0.6 +0.2 +0.0 +0.2 -0.3
carbon source acetate (C) +0.7 -0.0 +0.2 -0.1 -0.1
carbon source D-Serine (C) +0.3 -0.2 -0.0 +0.0 +0.6
carbon source D-Glucuronic Acid (C) +0.8 +0.1 +0.0 +0.0 -0.1
phage V2_1 +0.8 +0.2 +0.2 +0.1 -0.2
carbon source L-tyrosine (C) +0.7 +0.3 +0.2 -0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.3 -0.0 +0.4 -0.2
carbon source Adenine (C) +0.6 +0.1 +0.2 +0.0 +0.3
carbon source Gly-Glu (C) +0.6 +0.3 +0.1 +0.1 +0.2
carbon source propionate (C) +0.3 +0.4 -0.1 -0.0 +3.1
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ABID97_RS28675
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ABID97_RS28680
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ABID97_RS28695
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