Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28620 and ABID97_RS28625 are separated by 101 nucleotidesABID97_RS28625 and ABID97_RS28630 are separated by 37 nucleotidesABID97_RS28630 and ABID97_RS28635 are separated by 244 nucleotidesABID97_RS28635 and ABID97_RS28640 overlap by 4 nucleotides ABID97_RS28620: ABID97_RS28620 - CoA transferase, at 643,316 to 644,203 _RS28620 ABID97_RS28625: ABID97_RS28625 - MaoC family dehydratase N-terminal domain-containing protein, at 644,305 to 645,447 _RS28625 ABID97_RS28630: ABID97_RS28630 - AMP-binding protein, at 645,485 to 647,041 _RS28630 ABID97_RS28635: ABID97_RS28635 - IclR family transcriptional regulator, at 647,286 to 648,008 _RS28635 ABID97_RS28640: ABID97_RS28640 - PaaI family thioesterase, at 648,005 to 648,445 _RS28640
Group Condition ABID97_RS28620 ABID97_RS28625 ABID97_RS28630 ABID97_RS28635 ABID97_RS28640
carbon source L-Leucine (C) -0.7 -0.3 -1.0 -6.5 N.D.
carbon source Tween 20 (C) -0.1 -0.2 -0.3 -5.4 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.1 -0.3 -5.1 N.D.
carbon source L-Leucine (C) -0.8 -0.4 -0.7 -3.7 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.7 -0.4 -4.0 N.D.
carbon source Tween 20 (C) -0.2 +0.0 -0.8 -4.1 N.D.
carbon source L-Tryptophan (C) -0.4 -0.2 -0.2 -3.9 N.D.
carbon source L-tyrosine (C) -0.2 -0.9 -0.2 -2.9 N.D.
carbon source butyrate (C) +0.3 -0.1 -0.3 -3.9 N.D.
carbon source butyrate (C) +0.2 -1.3 -0.4 -2.5 N.D.
carbon source L-Histidine (C) -0.4 -0.5 -0.0 -2.9 N.D.
carbon source L-Threonine (C) -0.5 -0.2 -0.4 -2.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.1 -0.6 -2.6 N.D.
carbon source L-Tryptophan (C) -0.1 -0.4 -0.1 -2.9 N.D.
carbon source L-Histidine (C) -0.7 +0.1 +0.3 -2.9 N.D.
carbon source L-Threonine (C) -0.1 -0.4 +0.1 -2.6 N.D.
carbon source D-Glucuronic Acid (C) +0.1 -0.3 -0.3 -2.5 N.D.
carbon source D-Xylose (C) -0.0 -0.5 -0.2 -2.2 N.D.
carbon source L-Alanine (C) +0.4 -0.8 -0.3 -2.0 N.D.
carbon source L-Lactate (C) -0.3 -0.4 -0.2 -1.8 N.D.
carbon source D-Serine (C) -0.1 -0.6 -0.4 -1.5 N.D.
carbon source Formate (C) +0.3 -0.6 -0.5 -1.9 N.D.
carbon source D-Arabinose (C) -0.1 -0.5 -0.2 -1.8 N.D.
carbon source D-Mannose (C) +0.3 -0.4 +0.1 -2.5 N.D.
carbon source Gly-Glu (C) +0.2 -0.3 -0.3 -1.9 N.D.
carbon source D-Glucose (C) +0.3 -0.8 +0.2 -1.8 N.D.
carbon source D-Gluconic Acid (C) +0.3 -0.3 +0.0 -2.2 N.D.
carbon source D-Mannose (C) -0.2 +0.2 -0.1 -2.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.1 +0.4 -2.3 N.D.
carbon source L-Fucose (C) +0.2 +0.3 +0.4 -2.1 N.D.
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