Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28420 and ABID97_RS28425 are separated by 176 nucleotidesABID97_RS28425 and ABID97_RS28430 are separated by 10 nucleotidesABID97_RS28430 and ABID97_RS28435 are separated by 4 nucleotidesABID97_RS28435 and ABID97_RS28440 are separated by 187 nucleotides ABID97_RS28420: ABID97_RS28420 - tripartite tricarboxylate transporter substrate binding protein, at 604,003 to 604,821 _RS28420 ABID97_RS28425: ABID97_RS28425 - SDR family NAD(P)-dependent oxidoreductase, at 604,998 to 605,777 _RS28425 ABID97_RS28430: ABID97_RS28430 - thiolase family protein, at 605,788 to 606,924 _RS28430 ABID97_RS28435: ABID97_RS28435 - OB-fold domain-containing protein, at 606,929 to 607,285 _RS28435 ABID97_RS28440: ABID97_RS28440 - PrpF domain-containing protein, at 607,473 to 608,618 _RS28440
Group Condition ABID97_RS28420 ABID97_RS28425 ABID97_RS28430 ABID97_RS28435 ABID97_RS28440
carbon source L-Histidine (C) -0.3 -0.5 +0.3 -0.4 -1.5
carbon source D-Mannose (C) -0.5 -0.5 +0.1 -0.2 -1.0
carbon source D-Sorbitol (C) -0.3 -0.3 -0.1 +0.2 -1.5
carbon source L-Threonine (C) +0.2 -0.5 +0.0 -0.5 -1.1
carbon source D-Gluconic Acid (C) -0.1 -0.1 -0.1 -0.0 -1.4
carbon source D-Arabinose (C) -0.8 -0.1 +0.0 -0.9 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.5 -0.1 -0.2 +0.4 -1.1
carbon source D-Mannose (C) -0.7 +0.2 -0.0 -0.3 -0.7
carbon source D-Ribose (C) -0.4 -0.3 +0.1 -0.4 -0.4
carbon source Formate (C) +0.2 -0.3 -0.1 -0.1 -1.0
carbon source L-Arabinose (C) -0.2 +0.0 -0.3 +0.3 -1.1
carbon source D-Serine (C) +0.1 -0.5 -0.3 +0.1 -0.6
carbon source Ethanol (C) -0.0 -0.2 +0.0 +0.1 -1.2
phage V2_100 -0.4 -0.5 +0.4 -0.3 -0.3
carbon source Glucuronamide (C) +0.4 -0.0 -0.2 -0.9 -0.3
carbon source D-Fructose (C) +0.2 -0.2 +0.0 -0.3 -0.9
carbon source Tween 20 (C) -0.7 -0.3 -0.2 -0.1 +0.3
carbon source L-Phenylalanine (C) -0.2 -0.0 -0.1 +0.3 -0.9
carbon source Glycolic Acid (C) +0.2 +0.1 +0.0 +0.1 -1.1
carbon source L-Phenylalanine (C) +0.3 +0.0 +0.2 +0.2 -1.1
carbon source L-Glutamine (C) -0.2 +0.2 +0.2 +0.5 -1.1
plant outgrowth control Plant outgrowth control -0.3 -0.1 +0.2 -0.5 +0.4
carbon source D-Glucose (C) +0.5 -0.2 +0.2 -0.1 -0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.2 -0.2 +0.7 -1.3
carbon source L-Leucine (C) +0.4 +0.0 -0.1 +0.3 -0.7
r2a outgrowth control R2A outgrowth control +0.3 -0.2 +0.0 -0.5 +0.7
carbon source L-tyrosine (C) +0.7 -0.7 +0.1 +0.6 -0.3
carbon source D-Glucuronic Acid (C) +1.5 +0.2 -0.3 -0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.5 +0.7 +0.1 +0.6
carbon source D,L-Malic Acid (C) +0.8 -0.0 +0.0 +0.7 +0.0
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ABID97_RS28420
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ABID97_RS28425
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ABID97_RS28435
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ABID97_RS28440
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